Gene PSPTO_5163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5163 
Symboldtd 
ID1186848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp5876289 
End bp5876726 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content56% 
IMG OID637396482 
ProductD-tyrosyl-tRNA(Tyr) deacylase 
Protein accessionNP_794894 
Protein GI28872275 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1490] D-Tyr-tRNAtyr deacylase 
TIGRFAM ID[TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGTT TGTTGCAGCG CGTGCGCAGC GCACGCGTCG AGGTGGGTAC CGAGGTCGTT 
GGTGCTATCG ATCAAGGTAT ATTGGTGCTG GTCGGGATAG AGCCTCAAGA CACTCGCGCC 
AGTGCCGATA AGTTGCTGCA CAAACTGCTC AATTATCGTG TGTTCAGCGA CGCCGACGGC 
AAGATGAACC TGTCATTGCG CGAAGTCAGC GGCGGATTGC TGCTGGTTTC GCAGTTCACG 
CTGGCTGCCG ATACCAAAAG CGGGTTGCGC GCAGGGTTCT CGAAAGCCGC TGCTCCAGCG 
CTGGGTGCCG AGTTGTTTGA CTACCTATTG AGTCAGGCCA GAATCGCGCA CCCGGTCGTG 
GCAGCGGGCC AATTTGGTGC GGATATGCAG GTGCACCTGA TAAATGATGG CCCTGTGACA 
TTTTTGTTTG AGACGTAA
 
Protein sequence
MKGLLQRVRS ARVEVGTEVV GAIDQGILVL VGIEPQDTRA SADKLLHKLL NYRVFSDADG 
KMNLSLREVS GGLLLVSQFT LAADTKSGLR AGFSKAAAPA LGAELFDYLL SQARIAHPVV 
AAGQFGADMQ VHLINDGPVT FLFET