| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5152 |
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| Symbol | ubiB |
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| ID | 1186837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5862390 |
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| End bp | 5864009 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637396471 |
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| Product | ubiquinone biosynthesis protein UbiB |
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| Protein accession | NP_794883 |
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| Protein GI | 28872264 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0661] Predicted unusual protein kinase |
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| TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGC TTGCCGTCCG CCGTCTGTTT CGCATTCAAC GTGTCGTTAT TCGCTATCGC
CTCGATGACT TGTTGTTCGC TTTGCCCTTG CCGTGGTGGA TGCTCGCGGT GCGTTTCGTG
CTGCCCTGGC GCTGGCTGCC ACGGCGCAAG TCCGAGCTGA GCCGTGGCGT ACGTTTTCGT
CTGGCACTGC AAGACCTGGG GCCGATTTTC ATCAAGTTCG GGCAACTGCT GTCCACGCGC
CGCGATCTGC TGCCCGAAGA CATCGCCGAC GAGCTGATGC TGCTGCAGGA CCGCGTGCCG
CCGTTCGACC AGCAAGTGGC CATCAAGCTG ATCGAAGAAC AACTGGGCGC ACGTATCTGC
GATGTGTTCA GCCGGTTTGA CGAAACACCA TTGGCATCGG CGTCGGTGGC GCAAGTGCAT
GCCGCGTGCC TCAAGACTGG CGAAGAAGTC GTGGTGAAAG TGGTACGCCC GGGGCTCAAA
CCGATCATCG GCCAAGACCT TGCCTGGCTG TTCATCCTTG CCCGCATGGC CGAGCGTGTT
TCCGCCGATG CGCGCCTGCT GCACCCGGTG CAGGTGGTGA TGGACTACGA AAAAACCATC
TACGACGAGC TGGACCTGCT GCGCGAAGCG GCCAACTCCA GCCAGCTGCG CCGCAACTTC
GAAGGCTCCG ACCTGCTTTA CGTGCCACAA GTCTACTGGG ACTGGTGCCG TCCGAAAGTA
CTGGTCATGG AGCGCATCTA CGGCCTGCAG GTCACTGACA TGGCCGGGCT GGCCGATCAG
CGCACCGACA TGAAGATGCT CGCCGAGCGC GGCGTGGAGA TCTTCTTCAC GCAGATCTTT
CGCGACAGCT TTTTCCATGC TGACATGCAC CCCGGCAATA TTTTCGTCAG CACGGTCAAT
CCGTGGGCGC CGAAATACAT CGCCATCGAC TGCGGCATCG TCGGCAGTCT TACGCCGGAA
GACCAGGATT ATCTGGCGCG TAACCTGTTT GCCTTCTTCA AACGCGATTA TCGCCGGGTT
GCGCAGTTGC ACATCGATTC GGGCTGGGTG CCGGCCGAGA CCAAGCTCAA TGAATTCGAA
GCGGCCATCC GTACCGTCTG CGAGCCGATC TTCGAGAAGC CGCTCAAGGA TATTTCCTTT
GGTCAGGTGC TGATGCGCCT GTTCCAGACC GCGCGCCGCT TCAATATGGA AGTTCAGCCG
CAACTGGTTC TGCTGCAAAA GACCCTGCTC AACATCGAAG GGCTGGGTCG TCAGCTGTAC
CCGGAGCTGG ATCTGTGGAG CACCGCGCAG CCGTATCTGG AGCGCTGGAT GCGTGAGCGG
GTCAGCCCGA AAACCCTGCT GGGCAACCTG CAATCCCAGG TCGAGCAACT ACCGCATATC
GCCGGCATGA CCCGCGACCT GCTGGAGCGC ATGTCCCGCC CGCATGCTTC GGACCCGCCA
CGCCCCTGGC ACGATCGCAA GGACGAGCCG GTCTTGCGGC TCATCGGTGC GGCCTTGCTG
GTGGGCGGTG CGATACAGGG CTGGGTGATG AGCGAGGCAG CCACGCAGCT GCTGACGCTG
ACCGCATGGC CGGCGGCGAT CATGCTGATC GCCGGGCTGT ATCTGATCGT TCGCCGATAG
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| Protein sequence | MKLLAVRRLF RIQRVVIRYR LDDLLFALPL PWWMLAVRFV LPWRWLPRRK SELSRGVRFR
LALQDLGPIF IKFGQLLSTR RDLLPEDIAD ELMLLQDRVP PFDQQVAIKL IEEQLGARIC
DVFSRFDETP LASASVAQVH AACLKTGEEV VVKVVRPGLK PIIGQDLAWL FILARMAERV
SADARLLHPV QVVMDYEKTI YDELDLLREA ANSSQLRRNF EGSDLLYVPQ VYWDWCRPKV
LVMERIYGLQ VTDMAGLADQ RTDMKMLAER GVEIFFTQIF RDSFFHADMH PGNIFVSTVN
PWAPKYIAID CGIVGSLTPE DQDYLARNLF AFFKRDYRRV AQLHIDSGWV PAETKLNEFE
AAIRTVCEPI FEKPLKDISF GQVLMRLFQT ARRFNMEVQP QLVLLQKTLL NIEGLGRQLY
PELDLWSTAQ PYLERWMRER VSPKTLLGNL QSQVEQLPHI AGMTRDLLER MSRPHASDPP
RPWHDRKDEP VLRLIGAALL VGGAIQGWVM SEAATQLLTL TAWPAAIMLI AGLYLIVRR
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