Gene PSPTO_5151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5151 
Symbol 
ID1186836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp5861770 
End bp5862393 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content63% 
IMG OID637396470 
Producthypothetical protein 
Protein accessionNP_794882 
Protein GI28872263 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGCTTC GGGGGCTGCT CGCCAGCATC GAGCACGGTA TCAATCGGGT GTTGCGCCTG 
GACAGCACAG CGTTGCCGCG CCTGGCGCGT CTGTCCGGCC ATGTCATTGC CGTCGATTGC 
CGCGACCCGT CCCTGAAAAT CTTCATTCTG CCCAGTGACG AAGGCCTGTT GCTGGCCGCT 
GACTGGGCCG CCGATGCCGA CTGCACCCTG CGTGCACCGG CTTCCAGCCT GTTGCGTCTG 
GCCCTGAGCA AGGACAAGAC CGCCGTGCTG CATGGCCCGG ACGTCGAACT TGAGGGTGAC 
AGCGGCGTAC TGCTGGAACT GACCGGCATT CTTCAGGACC TCGAACTGGA CTGGGAGCAC 
GAACTGTCCA ATTGGGTCGG CCCTGTGGCA AGCCAGCTAT TCAGCAGCCG CGTGCGCAGC 
AGCGGGCGCT GGACGCGGGA AAGCTTCACC AGCCTCAGCC AGAACGTTGC CGACTACCTC 
AGCGAAGAAT CGCGTACGCT GGTGGGCAAT CACGAAGCCG AGGCACGCTT CGCCGAACTC 
GACCGGATCA AACTCGATCT GGACCGTCTC GAGGCGCGTT TTGCCCGCCT TGCCCACTTT 
CTCAATACCA GCGATAACGC ATGA
 
Protein sequence
MLLRGLLASI EHGINRVLRL DSTALPRLAR LSGHVIAVDC RDPSLKIFIL PSDEGLLLAA 
DWAADADCTL RAPASSLLRL ALSKDKTAVL HGPDVELEGD SGVLLELTGI LQDLELDWEH 
ELSNWVGPVA SQLFSSRVRS SGRWTRESFT SLSQNVADYL SEESRTLVGN HEAEARFAEL 
DRIKLDLDRL EARFARLAHF LNTSDNA