| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5150 |
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| Symbol | ubiE |
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| ID | 1186835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5861000 |
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| End bp | 5861770 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637396469 |
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| Product | ubiquinone/menaquinone biosynthesis methyltransferase UbiE |
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| Protein accession | NP_794881 |
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| Protein GI | 28872262 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGATC AGCGCAAAGG CAGCGATGCC GAACCTACGA CTCACTTCGG TTACAAAAAT
GTACCGGAAA GCCAGAAGGC AGAAAAAGTC GCTGAGGTTT TCCATTCGGT CGCGGCCAAG
TACGACCTCA TGAACGACTT GCTGTCCGGT GGCATGCACC GCCTGTGGAA GCGTTTCGCC
ATTGAGCTGT CCGGCGTGCG CACCGGCAAC CGCGTGCTCG ACATCGCTGG CGGCACAGGT
GATCTGACCC GCAAATTCTC GAACCTGGTC GGCCCGACCG GGCAAGTGGT TCTGGCTGAC
ATCAACGCCT CCATGCTCAA GGTCGGTCGC GACCGCCTGC TGGACCTCGG TGTGTCGGGC
AACGTCGAGT TTGTCCAGGC CGACGCCGAA AAACTGCCGT TTCCAGACAA CCATTTCGAC
TGCGTGACCA TCGCTTTCGG CCTGCGCAAC GTGACGCACA AGGAAGACGC TCTGCGCTCC
ATGCTGCGCG TGCTCAAGCC GGGTGGCCGC TTGCTGGTGC TGGAGTTCTC CAAGCCGACC
AACAAGCTCA TGTCCAAGGC TTACGATGCT TACTCGTTCG CGTTCATGCC GCTGATGGGC
AAACTGGTCA CCAATGATTC GGAAAGCTAC CGCTATCTGG CCGAATCTAT CCGCATGCAC
CCCAATCAGG AAACCCTCAA GTCGATGATG GTCGACGCCG GTTTCGACCG CGTGACCTAT
CACAACATGA CGGCGGGTGT CGTCGCCCTG CACCGCGGTA TCAAACCCTG A
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| Protein sequence | MNDQRKGSDA EPTTHFGYKN VPESQKAEKV AEVFHSVAAK YDLMNDLLSG GMHRLWKRFA
IELSGVRTGN RVLDIAGGTG DLTRKFSNLV GPTGQVVLAD INASMLKVGR DRLLDLGVSG
NVEFVQADAE KLPFPDNHFD CVTIAFGLRN VTHKEDALRS MLRVLKPGGR LLVLEFSKPT
NKLMSKAYDA YSFAFMPLMG KLVTNDSESY RYLAESIRMH PNQETLKSMM VDAGFDRVTY
HNMTAGVVAL HRGIKP
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