Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5142 |
Symbol | |
ID | 1186827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5853065 |
End bp | 5853451 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637396462 |
Product | hypothetical protein |
Protein accession | NP_794874 |
Protein GI | 28872255 |
COG category | [S] Function unknown |
COG ID | [COG3536] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGGCTGC TCTTAATGCT CCCCACTGCT ATCCATCTGC ACAAAGCCTC TAAAACCCTG ACGCTGAAAT ACGCGGCGAA TGAGGAATAT CACCTCCCTG CCGAGTTTCT GCGCGTGCAT TCGCCGTCTG CTGAAGTTCA GGGGCATGGC CGGCCAATCC TGCAGTTCGG CAAGCTGGGC GTCGGCCTGA GCAAGGTTGA ACCTGCGGGG CAATACGCAC TGAAACTGAC CTTCGACGAT GGTCATGACT CAGGACTGTT CACTTGGGAC TACCTGTACC AACTGGCCAC ACGCCAGGCG GCGCTGTGGG AAGATTATTT GCAGGAGTTG AAAAAAGCCG GCAAATCCCG CGACCCTTCC GAGCAAGTCA TCAAGCTGAT GCTCTGA
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Protein sequence | MRLLLMLPTA IHLHKASKTL TLKYAANEEY HLPAEFLRVH SPSAEVQGHG RPILQFGKLG VGLSKVEPAG QYALKLTFDD GHDSGLFTWD YLYQLATRQA ALWEDYLQEL KKAGKSRDPS EQVIKLML
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