Gene PSPTO_5142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5142 
Symbol 
ID1186827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5853065 
End bp5853451 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content56% 
IMG OID637396462 
Producthypothetical protein 
Protein accessionNP_794874 
Protein GI28872255 
COG category[S] Function unknown 
COG ID[COG3536] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGGCTGC TCTTAATGCT CCCCACTGCT ATCCATCTGC ACAAAGCCTC TAAAACCCTG 
ACGCTGAAAT ACGCGGCGAA TGAGGAATAT CACCTCCCTG CCGAGTTTCT GCGCGTGCAT
TCGCCGTCTG CTGAAGTTCA GGGGCATGGC CGGCCAATCC TGCAGTTCGG CAAGCTGGGC
GTCGGCCTGA GCAAGGTTGA ACCTGCGGGG CAATACGCAC TGAAACTGAC CTTCGACGAT
GGTCATGACT CAGGACTGTT CACTTGGGAC TACCTGTACC AACTGGCCAC ACGCCAGGCG
GCGCTGTGGG AAGATTATTT GCAGGAGTTG AAAAAAGCCG GCAAATCCCG CGACCCTTCC
GAGCAAGTCA TCAAGCTGAT GCTCTGA
 
Protein sequence
MRLLLMLPTA IHLHKASKTL TLKYAANEEY HLPAEFLRVH SPSAEVQGHG RPILQFGKLG 
VGLSKVEPAG QYALKLTFDD GHDSGLFTWD YLYQLATRQA ALWEDYLQEL KKAGKSRDPS
EQVIKLML