Gene PSPTO_5139 details

Gene Information

• Locus tag: PSPTO_5139
• ID: 1186824
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 5850205
• End bp: 5850900
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637396459
• Product: hypothetical protein
• Protein accession: NP_794871
• Protein GI: 28872252
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG3087] Cell division protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.91203
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCAGTTG CGAAGAAAAA ACCGGCACCC AAGCGGGGCG CCAGCCGTTA TCAGGCACCC 
GCGAAGAAGC CGATTCCAGG ATGGTTGTGG CTGGCGATTG GCTTGACCGT GGGCGCATTC 
GTGGTCTTTC TGATGAAGCT CGAACCGGGC GGCGAAGACG TCAAGCGGGT CAAGGCGGAC 
GCCAAGGCCG CGAAGATCGC CGAAGCGAAC AAGACGCCAC CGAGCCCCAC TGCGCCGGTC 
AAGCCGAAGT ACGACTTCTA CACGCTGCTG CCGGAATCGG AAGTGATCGT GCCCAACGAA 
GCGGTCCCGG AGAAGACGCC GCCGCCTGTG GCACCGACCG CCCCGGTTTC GCCCGAACAG 
GCTGCCAAGA TCGACACGGC ACGCGCCCAG GCAGCCCTCA GCGGCCTGAC GCCGCCACCG 
GCTCCGCCCG TCGCCACTAC CAAGCCAGCG GCGGTCACGA CGTTCTTCCT GCAGGCGGGC 
TCGTTCCGCA AACAGGCTGA CGCCGAGAAA GTCCGCGCGC AAATCATCCT GCTGGGCCAG 
ACTTCGACAG TGGAGTCCGG CACGGTGAAG GATGAAACCT GGTACCGCGT ATTGGTCGGC 
CCGTTCAGCA ACCGCGAACA ACTGACCACC GCCCAGAAAC AACTGGCAGG CGGCGGTTTT 
AGTAACCTGT TGTTGCAACA GCGCCAGAGC CGGTAA 

 

Protein sequence

MAVAKKKPAP KRGASRYQAP AKKPIPGWLW LAIGLTVGAF VVFLMKLEPG GEDVKRVKAD 
AKAAKIAEAN KTPPSPTAPV KPKYDFYTLL PESEVIVPNE AVPEKTPPPV APTAPVSPEQ 
AAKIDTARAQ AALSGLTPPP APPVATTKPA AVTTFFLQAG SFRKQADAEK VRAQIILLGQ 
TSTVESGTVK DETWYRVLVG PFSNREQLTT AQKQLAGGGF SNLLLQQRQS R