| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5138 |
|---|
| Symbol | argS |
|---|
| ID | 1186823 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 5848467 |
|---|
| End bp | 5850203 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637396458 |
|---|
| Product | arginyl-tRNA synthetase |
|---|
| Protein accession | NP_794870 |
|---|
| Protein GI | 28872251 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0018] Arginyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00456] arginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.447973 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACA CCATTCGCCA GCTGATTCAA CAAGCCCTGA CCCGTCTCGT CACCGAGGGC
GTCTTGCCAG AAGGGCTGAC GCCGGCGATC CAGGTGGAAA ACGCCCGTGA CAAGACCCAC
GGCGACTTCG CCAGCAATAT CGCGATGATG CTCGCCAAGC CTGCCGGCAT GAAGCCCCGC
GATCTGGCTG AAAAGCTGAT CGCCGCGCTG CCTGCCGACG AGCAGGTCAG CAAGGTCGAA
ATTGCCGGGC CGGGCTTTCT GAATTTTTTC CAGAACACGG CCGCGCTGGC TTCGCGCCTC
GACGCCGCCC TGTCCGACCC GCAACTGTCG GTCCGCAAGG CTGGCGCAGC CCAGCGTGTG
GTGGTCGATC TGTCGGCACC CAATCTGGCC AAGGAAATGC ACGTAGGGCA CCTGCGCTCG
ACCATCATTG GCGACGGCGT GGCCAACGTT CTCGAGTTTC TCGGTGACAC GGTCATTCGC
CAGAACCATG TCGGCGACTG GGGCACCCAG TTCGGCATGC TGCTGGCCTA TCTGCAGGAA
AAACCGGCGA CCAGCGACGA GCTGTCAGAC CTGGAAAACT TCTACCGCGC CGCCAAACAA
CGCTTTGACG AGTCAGAAGA GTTCGCCGAG CGGGCTCGCG GGCTGGTGGT CAAGCTGCAA
GCCGGCGATG CCGAATGCCT GACGCTGTGG ACGCGCTTCA AGGATATTTC GCTGTCGCAC
TGCCAACAAA CCTACGAGCG TCTCAACGTC AAACTGACCC CGGCCGATGT CATGGGCGAA
AGTGCCTATA ACGATGACCT GGCCAATGTC GTCAACGACC TGAAAGCCGC TGGCCTGCTG
GTTGAAAGCA ATGGCGCACA GTGCGTGTTC CTCGAAGAAT TTCGCACCGC CGATGACACG
CCCCTGCCGG TGATCGTGCA AAAGGCCGGT GGCGGTTATC TGTACGCCAC CACCGACCTG
GCCGCCATTC GCTACCGCAG CAAAGTGCTC AAGGCCGACC GCGCACTGTA TTTTGTCGAC
CAGCGTCAGG CGCTGCACTT CCAGCAGGTG TTTGAAGTGG CTCGCCGCGC CGGTTTCGTC
CACGAAGGCA TGCAACTGGA ACACATGGGT TTTGGCACTA TGAACGGGGC CGACGGCCGT
CCGTTCAAGA CCCGCGACGG CGGCACGGTC AAGCTCATCG ACCTGCTCGA TGAAGCCCAA
GAGCGCGCCT ACACGCTGGT CAAGGAAAAG AACCCGCAAG TCGCCGAGGC CGAGCTGCGC
AGCATTGCCA AGGCCGTGGG CATCAGCGCG GTGAAATACG CCGACCTGTC CAAGCACCGC
GCCAGCGATT ACAGCTTCAA CTTCGATCAG ATGCTGAGCT TTGAAGGCAA TACTGCGCCT
TACCTGTTGT ATGCCTACAC CCGTGTAGCC GGCGTATTCC GCAAGCTGGG CACGCCTTTC
GACGCCAGCA AAGGGCACAT CGTCCTTGAG GCGCCGCAGG AGCAGGAACT GGCTGCACGC
TTGGCGCAGT TCAACGAAAC ACTGAATAAC GTCGCAGAAA AAGGCACACC GCACGTACTT
TGTGCTTACC TGTATGACCT TGCGGGCCTG TTTTCGAGCT TTTACGAAAA CTGCCCGATC
CTTGGTGCGG AAAATCCCGA TCAGCAGCAG AGCCGTCTGC GTCTGGCTGC CCTGACCGGC
CGCACCCTCA AGCAAGGCCT GGATCTGTTG GGTCTGGAAA CTCTGGAGCG TATGTAA
|
|---|
| Protein sequence | MKDTIRQLIQ QALTRLVTEG VLPEGLTPAI QVENARDKTH GDFASNIAMM LAKPAGMKPR
DLAEKLIAAL PADEQVSKVE IAGPGFLNFF QNTAALASRL DAALSDPQLS VRKAGAAQRV
VVDLSAPNLA KEMHVGHLRS TIIGDGVANV LEFLGDTVIR QNHVGDWGTQ FGMLLAYLQE
KPATSDELSD LENFYRAAKQ RFDESEEFAE RARGLVVKLQ AGDAECLTLW TRFKDISLSH
CQQTYERLNV KLTPADVMGE SAYNDDLANV VNDLKAAGLL VESNGAQCVF LEEFRTADDT
PLPVIVQKAG GGYLYATTDL AAIRYRSKVL KADRALYFVD QRQALHFQQV FEVARRAGFV
HEGMQLEHMG FGTMNGADGR PFKTRDGGTV KLIDLLDEAQ ERAYTLVKEK NPQVAEAELR
SIAKAVGISA VKYADLSKHR ASDYSFNFDQ MLSFEGNTAP YLLYAYTRVA GVFRKLGTPF
DASKGHIVLE APQEQELAAR LAQFNETLNN VAEKGTPHVL CAYLYDLAGL FSSFYENCPI
LGAENPDQQQ SRLRLAALTG RTLKQGLDLL GLETLERM
|
|---|
| |