| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5137 |
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| Symbol | priA |
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| ID | 1186822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5846150 |
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| End bp | 5848369 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637396457 |
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| Product | primosomal protein N` |
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| Protein accession | NP_794869 |
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| Protein GI | 28872250 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCCGACG CCATCCTGCG CCTTGCCCTG CCCTCGCCGC TTCGCCGCCT GTTCGACTAC
CGTGCCCCGG CGGGCGTGCT GCGCAGCGCC TTGCAGCCGG GCATGCGTCT GCGGGTGCCG
TTCGGACGGC GAGAAATGAT CGGGATTCTG GTGGAGGTGG TCGATCACAG CGAAGTGCCC
GCCGACAAGC TCAAGCCCGC CATCGCCCTG CTCGACAGCG AAGCACCGCT GCCGCCCGCG
CTGTTCAAGC TGTGCCTGTG GACGTCGCAG TATTATCAGC ACAGCCTGGG TGACACGCTG
AGCTGGGCGC TGCCCGGGCT GCTGCGTCAG GGCGAGCTGG CCGAAAGCCG CCAGGAACGC
TTCTGGCATG TGGCCGCCAA TGCCAGTGTC GATGACCCGC GTATCGCCCG TGCGCCCAAG
CAGCGTGAAG CGCTGACCAC CCTCGCCCAG CACCCGCATG GCGTGGCGCA TCAACTGCTC
GGCAAACTGC TGCTTAACAA GGACAGCCTC AACCTGTTGC TGGCCAAAGA ACTGGTATAC
GTCGAGGTGC GCAGTCACGC GCCCAGCGCA CGCCATGAAC ACTGGCTGGC GCAGCCGGAG
TTACCCCTCA ACACCGAGCA ACGCGCCGCT TACGAAGCCA TTCGTGCCGG GTTCGACAGC
TTCCATGCGT TTTTATTGGC GGGCGTCACG GGCAGTGGCA AGACCGAAGT CTATCTGCAG
CTGATTCGCG AAACCCTTGA AGCCGGCAAA CAGGCGCTGG TGCTGATCCC GGAGATCAAC
CTGGGACCAC AAACCCTGGC GCGCTTTGAA CAACGTTTCA ATGCCCGCAT CGCGCTGGTG
CACTCGGCCG TCAACGACCG TGAACGGCTG GATGCCTGGC TGGCCGCCCG CGATGGCGAA
GCCGACATTA TTATCGGTAC GCGCTCAGCA TTATTCACGC CGATGAAGAA CCCTGGCCTG
ATCATCATCG ACGAAGAACA CGACGGCTCC TATAAACAGC AGGAAGGCCT GCGCTATCAC
GCCCGCGACC TGGCGCTGGT GCGGGCACGC CAGGAAAACA TCCCGATTGT GCTCGGCTCG
GCCACGCCCT CACTGGAAAG CCTGCACAAC GCCTACACCG GACGCTATGG CCTGCTGCGC
CTGAACCAGC GCGCAGGCGG CGCGCAACAG CCGCGCTTCA TGCGTCTGGA CGTCAAGAGC
AGGCCGCTGG ACAGCGGCAT TTCCGGTCCG ATGCAACAGG CCATCGGCCA GACCCTGGCA
GCAGGTCAGC AAGTGCTGGT GTTTCTCAAC CGCCGCGGCT TTGCGCCGAC CCTGCTGTGC
CATGACTGCG GCTGGATGTC CGGCTGCCAG CGCTGCGATG CACGCATGAC AGTGCACCAA
CGCTCGGGCG AGTTGCGTTG CCACCATTGT GGCTATGTCG AGCGTGTGCC GCGCCAGTGT
CCGTCCTGCG GCAAGGTGGA TTTGCGCCCG GTAGGCGCAG GCACCGAACG CGCCGAAGAG
CGGCTGGCGA TTCTGTTCCC GGACTTTCCC GTGTTGCGCG TCGACCGCGA CAGCACCTCG
CGCAAGGACG CCATGAACCA GTTGTTCGCG ACCATCCAGC GCGGTCAGCC GTGCATTCTG
GTCGGCACGC AGATGCTCGC CAAAGGGCAT CACTTTCCCC GTGTGACGCT GGTGTCGATT
CTGGACGCCG ACGGCGGGCT GTTTTCCGGT GACTTCCGCG CCAGCGAGCG CATGGCGCAG
CTGATTGTGC AGGTGGCCGG GCGTGCCGGG CGTGCCGAAG AGCCGGGCAA GGTGATCATC
CAGACTCATC TGGCCGACCA TCCGCTGTTG ATCCAGCTCA CCGAACAGGG CTATTTCGCC
TTCGCCGAAC AAGCCCTGAG CGAACGCCGC TCGGCGGGCC TGCCACCGTT TTCCCACCTT
GCGCTGCTGC GCGCCGAAGC ACACAAACCG GGGCAGGCCG AGGCCTTTCT CGATCAGGCC
TGCAGCGATG CCGAGCAGTT GGTGGCGCAG ATGCAGCTGG GCGGCATCGA GCTGCTGGGG
CCTATTCCGG CACCGATGGA GCGCCGCGCC GGGCGTTATC GGGCGCAGTT GCTGGTGCAG
TCCAGCGCGC GCGCGCCGCT GCACAAATTG CTCGGCAGCT GGCTGCTGGC ACTGGAGCAA
ATGCCCAGCG GGCGACAGGT CCGATGGTCG CTGGATGTGG ACCCGGTGGA TCTTTATTAA
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| Protein sequence | MPDAILRLAL PSPLRRLFDY RAPAGVLRSA LQPGMRLRVP FGRREMIGIL VEVVDHSEVP
ADKLKPAIAL LDSEAPLPPA LFKLCLWTSQ YYQHSLGDTL SWALPGLLRQ GELAESRQER
FWHVAANASV DDPRIARAPK QREALTTLAQ HPHGVAHQLL GKLLLNKDSL NLLLAKELVY
VEVRSHAPSA RHEHWLAQPE LPLNTEQRAA YEAIRAGFDS FHAFLLAGVT GSGKTEVYLQ
LIRETLEAGK QALVLIPEIN LGPQTLARFE QRFNARIALV HSAVNDRERL DAWLAARDGE
ADIIIGTRSA LFTPMKNPGL IIIDEEHDGS YKQQEGLRYH ARDLALVRAR QENIPIVLGS
ATPSLESLHN AYTGRYGLLR LNQRAGGAQQ PRFMRLDVKS RPLDSGISGP MQQAIGQTLA
AGQQVLVFLN RRGFAPTLLC HDCGWMSGCQ RCDARMTVHQ RSGELRCHHC GYVERVPRQC
PSCGKVDLRP VGAGTERAEE RLAILFPDFP VLRVDRDSTS RKDAMNQLFA TIQRGQPCIL
VGTQMLAKGH HFPRVTLVSI LDADGGLFSG DFRASERMAQ LIVQVAGRAG RAEEPGKVII
QTHLADHPLL IQLTEQGYFA FAEQALSERR SAGLPPFSHL ALLRAEAHKP GQAEAFLDQA
CSDAEQLVAQ MQLGGIELLG PIPAPMERRA GRYRAQLLVQ SSARAPLHKL LGSWLLALEQ
MPSGRQVRWS LDVDPVDLY
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