| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5135 |
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| Symbol | |
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| ID | 1186820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5844940 |
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| End bp | 5845683 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396455 |
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| Product | staphylococcal nuclease-like protein |
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| Protein accession | NP_794867 |
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| Protein GI | 28872248 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCGCGA TTTGGCTGTC TGGTGCTCAG GCCTTCTGCC CGGCACCTGC TTCGTTGCCG
GTTGCTCACG TGCAGCGCGT GGTAGATGGC GACACGCTAC GCCTGACCGA CGGCCGCAAT
GTGCGCATGA TCGGCCTCAA TACCCCTGAA ACCGGCAAGA AAGGCCGCTC TGCCGAGCCA
TTCGCCGAGG CCGCCAAAAA GCGCCTGCAA GCGCTGGTGG ACAAAAGTGG CGGGCAAATC
AGTCTGCGTG TCGGTCAGCA GGGCAAGGAT CATTACGGCC GCACGCTGGC CAACGTTTAT
GGCCGCAATG GCGACAATCT TGAAGCGCAG TTGCTCAGTG AAGGGCTGGG CTATCTGGTC
GCTGTCGCGC CCAATGTGGC ACTGGTCGAC TGCCAGCAAA GCGCCGAGCG TGAGGCGCGT
CAGGCCCGGC GCGGGGTGTG GCGCAATTCG CAGGTGCAGC CTTCCGACAA ACTACGCAAA
GGCGGCTTTG CAGTGGTGTC TGGCAAGGTC AGGAGCGTGC AGCGTAATCG CGGTGGCATC
TGGATCGAAC TACACGGTTC GGTGGTGCTG CGCGTTGCCC CTGATCAGGC GTTCAGGTTC
GATATGGCGG CGCTTGAGCG TCTCAAGGGT CGGCAAATTG AAACGCGCGG CTGGGTGATT
GATCGTTCTG GCCGAGGTGG CTTGAAGGCC GGGCAGTCGC GCTGGATGAT CGCGTTGAGC
CATCCGGCAA TGCTAAGCCT TTAG
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| Protein sequence | MSAIWLSGAQ AFCPAPASLP VAHVQRVVDG DTLRLTDGRN VRMIGLNTPE TGKKGRSAEP
FAEAAKKRLQ ALVDKSGGQI SLRVGQQGKD HYGRTLANVY GRNGDNLEAQ LLSEGLGYLV
AVAPNVALVD CQQSAEREAR QARRGVWRNS QVQPSDKLRK GGFAVVSGKV RSVQRNRGGI
WIELHGSVVL RVAPDQAFRF DMAALERLKG RQIETRGWVI DRSGRGGLKA GQSRWMIALS
HPAMLSL
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