| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5129 |
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| Symbol | pilP |
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| ID | 1186814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5837657 |
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| End bp | 5838184 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396449 |
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| Product | type IV pilus biogenesis protein PilP |
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| Protein accession | NP_794861 |
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| Protein GI | 28872242 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3168] Tfp pilus assembly protein PilP |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGGGCGG CGCGATTGTT GTGCGTCAGT GTGGTTCTGG CAGGGCTGGC CGGTTGCGGC
AATGACAACG ATTTTGCCGA CCTGAGCGAG TTCATGGATC AGGCCAGGGC GCGCCCGAGC
GGCACGATCG AGCCCTTGCC GAAGTTTCGC CCGTATGAGG CCTTTACCTA TAACGCAGCG
GCCCTGCGCA GCCCGTTTCA GCCGCCGATC AAGATTGACC TGCTCAATCG TCAGAAAGGT
ACGCGGCTGG TGGCGCCGGA CGAGCATCGG GTCAGGCAGT TTCTCGAAGG GTTCAATATC
GAGGCGTTCG AGATGGTCGG CACGATCGGC AACGAGTCAG GGACGTTCGC CCTGTTGCGT
GGTGCCGGAG GCGTTCATCG CGTCAAGGTG GGCGATTACC TGGGGCGCAA CAATGGCCGG
GTAGTGTCGA TCGGAGATGC ACAGGTTGAT GTCATTGAAA TAGTTCCTGA TGGAGAGGGG
GCCTGGCTGG AAAGGCCGCG CAGTATTTCC CTCAAAGAAC GCTCATGA
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| Protein sequence | MRAARLLCVS VVLAGLAGCG NDNDFADLSE FMDQARARPS GTIEPLPKFR PYEAFTYNAA
ALRSPFQPPI KIDLLNRQKG TRLVAPDEHR VRQFLEGFNI EAFEMVGTIG NESGTFALLR
GAGGVHRVKV GDYLGRNNGR VVSIGDAQVD VIEIVPDGEG AWLERPRSIS LKERS
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