| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5127 |
|---|
| Symbol | aroK |
|---|
| ID | 1186812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 5834981 |
|---|
| End bp | 5835499 |
|---|
| Gene Length | 519 bp |
|---|
| Protein Length | 172 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637396447 |
|---|
| Product | shikimate kinase |
|---|
| Protein accession | NP_794859 |
|---|
| Protein GI | 28872240 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0703] Shikimate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGAAATT TAATACTTGT GGGGCCGATG GGTGCTGGCA AAAGCACCAT CGGCCGCTTG
CTTGCCAAAG AGTTGCGACT GCCGTTCAAG GATTCCGACA AGGAAATCGA GCTGCGCACG
GGCGCCAACA TCCCCTGGAT CTTCGACAAG GAGGGCGAAC CGGGTTTCCG GGAGCGCGAG
CAGGCCATGA TTGCCGAGTT GTGCGAAGCC GATGGCGTGG TTCTGGCCAC TGGCGGCGGC
GCAGTCATGC GCACTGAAAA CCGTCAGGCG CTGCGTGCCG GTGGGCGTGT GGTGTATCTG
CATGCCTCTA TCGAACAGCA GGTCGGGCGC ACCGCGCGTG ACCGAAATCG TCCTTTGTTG
CGTACTGCCG ATCCGGCCCG GGTGCTGAGC GAATTGCTGG CCATCCGCGA CCCGCTGTAT
CGGGAAATCG CCGACGTGGT GATCGAAACC GATGAGCGGC CACCCCGAAT GGTGGTTCTC
GAGATACTGG CGCGCCTTGC AGAGCTTCCT CCCCGTTAA
|
|---|
| Protein sequence | MRNLILVGPM GAGKSTIGRL LAKELRLPFK DSDKEIELRT GANIPWIFDK EGEPGFRERE
QAMIAELCEA DGVVLATGGG AVMRTENRQA LRAGGRVVYL HASIEQQVGR TARDRNRPLL
RTADPARVLS ELLAIRDPLY REIADVVIET DERPPRMVVL EILARLAELP PR
|
|---|
| |