| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5125 |
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| Symbol | |
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| ID | 1186810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5832123 |
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| End bp | 5833748 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396445 |
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| Product | hypothetical protein |
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| Protein accession | NP_794857 |
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| Protein GI | 28872238 |
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| COG category | [S] Function unknown
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3266] Uncharacterized protein conserved in bacteria
[COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.890867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAGTT TGCATGCCGA CGAGGCCTTC CTCGGCCATT ATCAGTTGAG TCATGACCCC
TTTGCAGCGC GGGTACCTGG CTTCAAATTC TTTCCTGCCC AGCGCAAGCC CGTGCTGGGT
CAGCTTCATC ATCTGGCGCG TTACAGCCAG TTGCTGCTGG CAGTCACCGG GCCACAGGGC
AGCGGCAAGA CCCTGCTGCG CCAGGCGCTG GTGGCCAGCA CCAACAAGCA GTCGGTGCAA
AGCGTCGTGG TTTCTGCGCG CGGTGCAGGC GATGCGGCGG GTGTATTGCA GCAGGTCGCC
CAGGCGCTGA GTGTCGCTCA GGCCGAAATG CAGGCAATCC TGTCGCAGGT CGTTCAGCTC
GGGCTGACCG GTCAGGAAGT CTACTTGCTG GTCGACGATG CGGAACAACT GGGCGATTCG
GCGCTCGAAG CGTTGCTGGG TCTTGCTGCG GGCACGCCGG AAGGGCGTCC GCATGTATTC
CTGTTCGGAG AGCCATCGCT GCTCGATCGT CTCGATCAGA TGTGTGCCGA CCTGCAGGGC
GATGTCGAAG GCGAACGCTT TCACGTCATC GAGCTGCAAC CCTATACGCA AGAGGAAACC
CGGGAGTATC TGGCTCAGCG TCTGGAGGGT GCAGGGCAGG GAATCGCATT GTTTACTGCC
GACCAGATCA CCGATATTCA TGAACAATCC GATGGCTGGC CTGGGGCAAT CAACCAGGTG
GCCCGCGATT CAATGATCGA GGCGATGATC GCGAGTCGTT CCGCGGTCAA GCGTCCAAGT
GTGGGGTTCA ACATGCCGAA AAAACACGTA TTGGCCTTGG GTGCCGTCGT CATAGTGGCC
GTGGCAGCAG CAGTGCTGAT CCCGGGTCGT GGTGACAAGA CGGGCGCACC TGCCAATGCC
CCTGCTTCCG CTCAGGCGCA ATTGCCGCTG GGCGAGGGCA AGCCAACTGC TCAGCAATCG
AACAACGGTA GCCCGGCCAT CGAATTTGCG GGCAATTCGC AACCGATGCC GCTGCCGATG
AACGGTAATT CGCAGCCGGT AATGCGCGGT CCGCTGGCTG AGGCCGCCGG TTCCAGCGAT
GTCGACGAAG ACGCAGTGCC GACAGGTTCG CCTGCCCAGC CGCCGACCGT GACCACCACC
GCGCCGCCAG CAGGCGTGCC TGCCGGTCAG GCCGCCGCTC AAACGCCACG TTCGTCGATT
CCTGCGCCAA CGCCTGCCGC CAAACCGACG CCAGCGCCAG CGCCGACTCA GGTTGCTGTC
GCCAAGCCTG CTCCAGCGCC TGCACCGGCC GCCAAGCCTG CCGAAAAACC GGCAGCTGCG
GCCGCCAAGC CAGCGACCGG TGGCAACTGG TACAGCAGTC AGGCACCAGG CCACTACGTA
GTGCAGATTC TCGGCACCAG CTCCGAAGCG ACGGCTCAGG CCTATATCGC AGAGCAAGGT
GGCGAGTACC GTTATTTCAA GAAAACCCTG CAGGGCAAGC CGCTGTACGT CATCACGTAT
GGCAACTTTC CTGACCGTGC TGCCGCTCTG GCAGCCATCA AGGTATTGCC AGCCAAGGTT
CAGGCTGGTA AACCTTGGCC TCGCACTGTC GCCAGCGTCC AACAAGAGCT CGGCGCCACC
CGCTGA
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| Protein sequence | MTSLHADEAF LGHYQLSHDP FAARVPGFKF FPAQRKPVLG QLHHLARYSQ LLLAVTGPQG
SGKTLLRQAL VASTNKQSVQ SVVVSARGAG DAAGVLQQVA QALSVAQAEM QAILSQVVQL
GLTGQEVYLL VDDAEQLGDS ALEALLGLAA GTPEGRPHVF LFGEPSLLDR LDQMCADLQG
DVEGERFHVI ELQPYTQEET REYLAQRLEG AGQGIALFTA DQITDIHEQS DGWPGAINQV
ARDSMIEAMI ASRSAVKRPS VGFNMPKKHV LALGAVVIVA VAAAVLIPGR GDKTGAPANA
PASAQAQLPL GEGKPTAQQS NNGSPAIEFA GNSQPMPLPM NGNSQPVMRG PLAEAAGSSD
VDEDAVPTGS PAQPPTVTTT APPAGVPAGQ AAAQTPRSSI PAPTPAAKPT PAPAPTQVAV
AKPAPAPAPA AKPAEKPAAA AAKPATGGNW YSSQAPGHYV VQILGTSSEA TAQAYIAEQG
GEYRYFKKTL QGKPLYVITY GNFPDRAAAL AAIKVLPAKV QAGKPWPRTV ASVQQELGAT
R
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