| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5123 |
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| Symbol | gltB |
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| ID | 1186808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5827318 |
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| End bp | 5831763 |
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| Gene Length | 4446 bp |
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| Protein Length | 1481 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637396443 |
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| Product | glutamate synthase, large subunit |
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| Protein accession | NP_794855 |
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| Protein GI | 28872236 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCAG GTCTGTACCA ACCAGATGAA TTCAAGGATA ACTGCGGCTT CGGCCTGATC
GCTCATATGC AGGGCGAGCC CAGTCATCAC CTGTTGCAGA CGGCCGTCCA GGCCCTGACC
TGCATGACCC ACCGTGGCGG TATCAACGCC GACGGCAAGA CCGGCGACGG TTGTGGTCTG
TTGATTCAGA AGCCCGACGG CTTCCTGCGT GCGATGGCCA GCGAGCACTT CGGTGTCGAA
CTGCCCCGTC AATATGCCGT GGGCATGGTG TTCCTCAATC AGGACGACAC CAAGGCCAAG
GCCGCACGCG AAAACATGAA CCGCGAGATC CTGGCCGAGG GCCTGGAACT TGTAGGCTGG
CGCCAGGTGC CGATCGATAC CAGCGTGCTG GGTCAACTGG CGCTGGAGCG ACTGCCGAAA
ATCGAGCAGG TGTACATCGG CGGCGAAGGC CTGAGTGATC AGGAGTTCGC CATCAAGCTG
TTCAGTGCCC GTCGCCGTTC ATCGGTTGCC AACGCTGCAG ATTCGGATCA CTACATCTGC
AGCTTTTCGC ACAAGACCAT CATTTATAAA GGCCTGATGA TGCCGGCCGA CCTCACGGCC
TTTTTCCCGG ACCTGAGCGA CGAGCGTCTG CAGACCGCAA TCTGCGTGTT CCACCAGCGC
TTTTCGACTA ACACCCTGCC GAAATGGCCG CTGGCTCAGC CTTTCCGCTT TCTTGCCCAC
AACGGCGAGA TCAACACCAT CACCGGTAAC CGTAACTGGG CACAGGCGCG TCGTACCAAG
TTCACCAACG ACCTGATGGA TCTGGACGAA TTGGGCCCGC TGGTCAACCG CGTGGGCTCC
GACTCGTCGA GCATGGACAA CATGCTTGAG CTGATGGTGA CCGGCGGCAT AGACCTGTTT
CGTGGCGTGC GCATGATCAT TCCGCCTGCG TGGCAGAACG TCGAGACCAT GGACCCGGAT
CTACGCGCCT TCTATGAATA CAACTCCATG CACATGGAGC CGTGGGACGG CCCGGCCGGC
ATCGTGATGA CCGAAGGTCG TCACGCGGTC TGCCTGCTCG ACCGCAACGG CCTGCGCCCG
GCGCGCTGGG TCACGACCAA GAATGGCTAC ATCACCCTCG CGTCGGAAAT CGGCGTGTGG
GACTACAAGC CCGAAGACGT CATCGCCAAG GGCCGTGTCG GTCCTGGGCA GATTTTTGCC
GTGGACACTG AAACCGGCCA GATCCTCGAC ACCGACGCTA TCGACAACCG CCTCAAGTCG
CGTCATCCGT ACAAGCAATG GCTGCGCAAG AATGCCCTGC GCATTCAGGC CACCATGGAA
GACAACGACC ACGGCTCGGC TTTCTATGAC AGCGAGCAGC TCAAGCAGTA CATGAAGATG
TATCAGGTCA CGTTCGAGGA GCGTGATCAG GTGCTGCGTC CGCTCGGCGA GCAGGGCCAG
GAAGCCGTGG GCTCGATGGG TGACGACACG CCGATGGCAG TGCTGTCGCG TCGCGTGCGT
TCGCCTTACG ATTACTTCCG CCAGCAGTTC GCGCAGGTTA CCAACCCGCC GATCGACCCG
CTGCGTGAAG CCATCGTCAT GTCGCTGGAG ATCTGCCTCG GTGCCGAGCG CAATATCTTC
CAGGAATCGC CAGAGCATGC TTCGCGCGTA ATCCTCAGCT CGCCAGTCAT TTCGCCGGCC
AAATGGCGTT CGCTGATGAA CCTGGAGCGT CCGGGTTTCG AGCGCCACAT TATCGACCTG
AACTACGACG AAAGCCTGGG CCTTGAAGCC GCTGTGCGTA ACGTCGCCGA TCAGGCCGAA
GAAGCGGTGC GTTCCGGGCA TACCCTGATT GTGCTGAGCG ACCGCCACAT TGCACCGGGC
AAACTGCCGG TGCACGCTTC GCTGGCCGTC GGCGCGGTTC ACCACCGTCT GACCGAGCAG
GGCCTGCGTT GCGACAGCAA CATTCTGGTC GAAACCGCCA CGGCGCGTGA CCCGCATCAT
TTCGCTGTGC TGATCGGTTT TGGCGCTTCG GCGGTCTATC CGTTCCTGGC CTACGAAGTG
CTGGGTGACC TGATCCGTAC CGGCGAAGTG CTGGGCGACC TGTACGAAGT CTTCAAGAAC
TACCGTAAAG GCATCACCAA GGGCCTGCTC AAGATTCTGT CGAAGATGGG CATTTCGACC
GTTGCGTCCT ACCGTGGTGC ACAACTGTTC GAAGCCATCG GCCTGTCCGA AGAAGTCTGC
AACACCAGCT TCCGCGGTGT GCCGAGCCGC TTGAAAGGCG CGCGTTTCGT CGATATCGAA
GCCGAACAGA AGGCCCTGGC CGCCGAAGCC TGGAGCCCGC GCAAGCCGAT CCAGCAGGGC
GGTCTGCTCA AGTTTGTCTA CGGTGGCGAA TACCACGCCT ACAACCCGGA CGTGGTCAGC
ACCCTGCAAG CCGCTGTACA GCAGGGTGAC TACAGCAAGT TCAAGGAATA CACCGCGCTG
GTGGACCAAC GTCCGGTGTC GATGATTCGT GACCTGTTGC AGGTCAAGAC CCTCGACCAG
CCGCTGAACA TCGACGAAAT CGAGCCGCTG AGCGAGATTC TCAAGCGCTT CGATTCGGCC
GGTATCTCGC TGGGTGCCTT GTCGCCCGAG GCTCACGAAG CGCTGGCCGA GGCAATGAAC
CGTCTGGGCG CGCGCTCCAA CTCCGGTGAA GGCGGTGAAG ACCCGGCGCG CTACGGCACC
ATTCGTAGCT CGAAAATCAA GCAGATTGCC ACCGGCCGCT TTGGTGTAAC GCCTGAGTAT
CTGGTCAACG CCGATGTGTT GCAGATCAAA GTCGCGCAGG GCGCCAAACC GGGTGAGGGC
GGGCAACTGC CGGGCGGCAA GGTCAACGGC CTGATCGCCA AACTGCGCTA TGCCGTACCG
GGTGTGACGC TGATTTCGCC GCCGCCGCAC CATGACATCT ATTCCATCGA AGACCTGTCG
CAGCTGATTT TCGACCTCAA ACAGGTCAAC CCGGCAGCGC TGGTCTCGGT CAAGCTGGTG
GCAGAAGCGG GCGTGGGCAC CATTGCCGCA GGCGTGGCCA AGGCCTATGC CGACCTGATC
ACCATTTCCG GCTACGACGG CGGCACCGGC GCTTCGCCGC TGACCTCTAT CAAATACGCT
GGCGCGCCGT GGGAACTGGG CCTGGCCGAA ACGCACCAGA CCCTGCGCGG CAATGACCTG
CGCGGCAAGG TCCGGGTGCA GACTGACGGT GGTCTGAAAA CCGGCCTCGA CGTGATCAAG
GCAGCCATTC TCGGTGCTGA AAGCTTCGGC TTCGGTACTG CACCAATGAT CGCGCTGGGC
TGCAAATACC TGCGCATCTG CCACCTGAAC AACTGCGCTA CCGGCGTCGC GACGCAGAAC
GAAAAGCTGC GCAAAGACCA CTACATCGGC ACCGTCGATA TGGTGATCAA CTTCTTCACC
TACGTGGCAG AAGAAACCCG TGAGTGGCTG GCCAGGCTGG GTGTTCGCAC GCTGGAAGAG
CTGATCGGTC GTACCGACCT GCTGGACATT CTGCCGGGCG AAACCGAAAA GCAACGGCAT
CTGGACCTCA CGCCTTTGCT GGGCAGCGAT CACATCCCGG CTGACAAGCC ACAGTTCAGC
CTGGTGGACC GCAACCCGCC GTTCGACAAA GGCCTGCTGG CAGAAAAAAT GGTCGAGCTG
GCCAAGCCGG CCATCGAAGC CCTCAGCGGC GGCGAGTTTG AGCTGGACAT CTGTAACTGC
GACCGTTCCA TCGGCGCGCG GATCTCCGGC GAAATCGCCA GACTGCACGG CAATCAGGGC
ATGAACAAGG CGCCGATCAC TTTCCGTTTC AAAGGCACTG CCGGGCAGAG CTTCGGGGTA
TGGAACGCTG GTGGTCTGAA CATGTACCTG GAAGGCGATG CCAACGACTA CGTCGGTAAA
GGCATGACCG CTGGCAAGCT GGTGATCGTG CCGCCCAAGG GCAGCCCGTT CAAGACCAAC
GAGAGCGCCA TCATCGGCAA CACCTGCCTG TACGGCGCAA CCGGCGGCAA GCTGTTTGCG
GCGGGTACCG CGGGCGAGCG TTTCGCGGTG CGTAACTCGG GTGCCCACAC GGTTGTGGAA
GGCACGGGCG ACCACTGCTG CGAGTACATG ACCGGTGGTT TCGTCTGCGT TCTGGGCAAG
ACCGGTTACA ACTTCGGTTC CGGCATGACC GGCGGTTTCG CTTACGTGCT CGATCAGGAC
AACACCTTCG TTGACCTGGT CAATCATGAA CTGGTCGAGA TCCAGCGCAT CAGCGGCGAG
TCGATGGAAG CTTATCGCAC TCACCTGCAG AGCGTTCTGA ACGAGTACGT GGCTGAAACC
GACAGTGAAT GGGGTCGTAA CCTCGCGGAA AACCTGGACG ATTACCTGCG TCGTTTCTGG
CTGGTCAAGC CCAAGGCTGC CAACCTGAAA TCGCTGCTCT CCAGCACTCG GGCGAATCCG
CAATAA
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| Protein sequence | MKAGLYQPDE FKDNCGFGLI AHMQGEPSHH LLQTAVQALT CMTHRGGINA DGKTGDGCGL
LIQKPDGFLR AMASEHFGVE LPRQYAVGMV FLNQDDTKAK AARENMNREI LAEGLELVGW
RQVPIDTSVL GQLALERLPK IEQVYIGGEG LSDQEFAIKL FSARRRSSVA NAADSDHYIC
SFSHKTIIYK GLMMPADLTA FFPDLSDERL QTAICVFHQR FSTNTLPKWP LAQPFRFLAH
NGEINTITGN RNWAQARRTK FTNDLMDLDE LGPLVNRVGS DSSSMDNMLE LMVTGGIDLF
RGVRMIIPPA WQNVETMDPD LRAFYEYNSM HMEPWDGPAG IVMTEGRHAV CLLDRNGLRP
ARWVTTKNGY ITLASEIGVW DYKPEDVIAK GRVGPGQIFA VDTETGQILD TDAIDNRLKS
RHPYKQWLRK NALRIQATME DNDHGSAFYD SEQLKQYMKM YQVTFEERDQ VLRPLGEQGQ
EAVGSMGDDT PMAVLSRRVR SPYDYFRQQF AQVTNPPIDP LREAIVMSLE ICLGAERNIF
QESPEHASRV ILSSPVISPA KWRSLMNLER PGFERHIIDL NYDESLGLEA AVRNVADQAE
EAVRSGHTLI VLSDRHIAPG KLPVHASLAV GAVHHRLTEQ GLRCDSNILV ETATARDPHH
FAVLIGFGAS AVYPFLAYEV LGDLIRTGEV LGDLYEVFKN YRKGITKGLL KILSKMGIST
VASYRGAQLF EAIGLSEEVC NTSFRGVPSR LKGARFVDIE AEQKALAAEA WSPRKPIQQG
GLLKFVYGGE YHAYNPDVVS TLQAAVQQGD YSKFKEYTAL VDQRPVSMIR DLLQVKTLDQ
PLNIDEIEPL SEILKRFDSA GISLGALSPE AHEALAEAMN RLGARSNSGE GGEDPARYGT
IRSSKIKQIA TGRFGVTPEY LVNADVLQIK VAQGAKPGEG GQLPGGKVNG LIAKLRYAVP
GVTLISPPPH HDIYSIEDLS QLIFDLKQVN PAALVSVKLV AEAGVGTIAA GVAKAYADLI
TISGYDGGTG ASPLTSIKYA GAPWELGLAE THQTLRGNDL RGKVRVQTDG GLKTGLDVIK
AAILGAESFG FGTAPMIALG CKYLRICHLN NCATGVATQN EKLRKDHYIG TVDMVINFFT
YVAEETREWL ARLGVRTLEE LIGRTDLLDI LPGETEKQRH LDLTPLLGSD HIPADKPQFS
LVDRNPPFDK GLLAEKMVEL AKPAIEALSG GEFELDICNC DRSIGARISG EIARLHGNQG
MNKAPITFRF KGTAGQSFGV WNAGGLNMYL EGDANDYVGK GMTAGKLVIV PPKGSPFKTN
ESAIIGNTCL YGATGGKLFA AGTAGERFAV RNSGAHTVVE GTGDHCCEYM TGGFVCVLGK
TGYNFGSGMT GGFAYVLDQD NTFVDLVNHE LVEIQRISGE SMEAYRTHLQ SVLNEYVAET
DSEWGRNLAE NLDDYLRRFW LVKPKAANLK SLLSSTRANP Q
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