| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5120 |
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| Symbol | |
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| ID | 1186805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5824060 |
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| End bp | 5825619 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637396440 |
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| Product | amidase family protein |
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| Protein accession | NP_794852 |
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| Protein GI | 28872233 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCA AGTTTGGTCT GTTTTGCGCG CTCTCTATTG CGCCCTTTGC ATTTGCATGT
GCTGACGATC AGGCAAATGC GCAATTCGAT GGGCCCGTTT TCGGATCGAT CATCGAAACG
AAGGCATCCC ATTTCGAATC TAGTGTGGAG CTTCAGAAAC GCTTGAGCGA AGGTAGCCTG
ACTTCCGCCG AGCTGGTCCA CGATCTGCTC CAGCGTATCG AAGCGCTGAA CAACAATGGC
CCGGCGCTCA ACGCTGTCAT CGAAGTCAAC CCCGAGGCTC GGCGGATAGC CACTCTGCTT
GACAGGGAGC GCTCCAGCGG CAAGCAAAGA GGGCCGCTGC ATGGCATTCC CGTACTGGTG
AAAGACAATA TCGATACGGC AGACAAAATG CAGACGACTG CAGGCGCACT TGCCATGGCC
GGCGCGCCTG CGCAGTACGA CGCTTTTGTA GTGCAGCGGC TACGCGAGGC GGGCGCGATC
ATTATCGGCA AGGCCAACCT CAGCGAATGG TCTAATTTCC GTGGGAGTAA CGTCCCGAAC
GGTTGGAGCG GCCGAGGCGG GCAAACGCGT CATCCATATG ACCTCGCTGC CAGTCCGCTT
GGCTCCAGTT CGGGTCCGGC GGTAAGTGTT GCAGCTGGCT TTGCGCCGCT GGCAGTGGGT
ACCGAAACCA ATGGTTCGAT CATTCAGCCT GCCGCCACCA GTGGCGTCGT GGGAGTGAGG
CCCACGTTGG GTCTGCTTAG CCGCTCTGGC ATGATTCCGA TCTCCAGTCG CCAGGACACC
CCCGGTCCAA TGGCGCGGAC GGTCACTGAT GCTGCCATCA TGCTGACGGC GATGAGCGGC
ACTGACCCGC TCGACAAAGC CACCTACCAA GTCCCCGGCA ACACCGTTAG CTACGTTGAG
TACCTCAGAG CTGGAGCGTT GAGAGGCAAG CGCCTGGGTT ATCCGAGCAA ACTGCCTGAC
GGTCGATTCA TGGACGACGA TCCCGCGTTC CAAAAGATAA AACGTAATCT GAGGTCTGCA
GGGGCGATAT TGGTTCCGGT CGACGTTCCG CTTGTTTCCA GCATGGCGGA GCCTGCAATG
CTCATGAATG ACTTCAAGCG TGAGCTTGAA GCGTACTTGA AAACCCGTCC CGGGCTTGAG
GTTCGTACGC TTGATGACAT CATTGCCTTC AATGTCGCGT CTCCTGGACC GGAAGGTTAC
AGTCAGGACG CGTTGATTGC GGCCTCGGGC ACGGTCGTAG ATCAGGCGAT CTATTTTTAT
GATGCAACCG ATTTACGCCG TTCCCATCAG CAGCTGATAG ACGGGCTCTT GCAACGACAC
TCGCTTGACG CGCTTATCGA CTGGTCGGAG AGTGCTTTCG GAGCGGTTGG CGCTATCGCG
GGTTACCCCG GAATGAACCT GCCTGTCGGA CTCAATAATG AAGGCCTGCC CAAAGGGCTG
TATTTTCTTT CCACGGCCTG GGATGAAGCT AAATTGCTGA GCTATGCCTA CGCACTCGAA
CAGGTTCTTT TGGCTGCGCC CTCAACCTCG ATCAGCACGA CTGTGCCGCG GGAAGATTGA
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| Protein sequence | MKLKFGLFCA LSIAPFAFAC ADDQANAQFD GPVFGSIIET KASHFESSVE LQKRLSEGSL
TSAELVHDLL QRIEALNNNG PALNAVIEVN PEARRIATLL DRERSSGKQR GPLHGIPVLV
KDNIDTADKM QTTAGALAMA GAPAQYDAFV VQRLREAGAI IIGKANLSEW SNFRGSNVPN
GWSGRGGQTR HPYDLAASPL GSSSGPAVSV AAGFAPLAVG TETNGSIIQP AATSGVVGVR
PTLGLLSRSG MIPISSRQDT PGPMARTVTD AAIMLTAMSG TDPLDKATYQ VPGNTVSYVE
YLRAGALRGK RLGYPSKLPD GRFMDDDPAF QKIKRNLRSA GAILVPVDVP LVSSMAEPAM
LMNDFKRELE AYLKTRPGLE VRTLDDIIAF NVASPGPEGY SQDALIAASG TVVDQAIYFY
DATDLRRSHQ QLIDGLLQRH SLDALIDWSE SAFGAVGAIA GYPGMNLPVG LNNEGLPKGL
YFLSTAWDEA KLLSYAYALE QVLLAAPSTS ISTTVPRED
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