| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5112 |
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| Symbol | |
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| ID | 1186797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5812173 |
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| End bp | 5813429 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396432 |
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| Product | major facilitator superfamily protein |
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| Protein accession | NP_794844 |
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| Protein GI | 28872225 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATCCTG CCGTCGCCCC GCCTACCACC GACCTGAATA CGTCCGCTAA ACCGTCTGGC
GACAGCTACA TCGAAAAGAA CACGCCGCTG TTCAAACGCA CCGCGCTGGC GCTGTTCGCG
GGTGGGTTCT CGACGTTCAC ACTGCTGTAT TGCGTCCAGC CGATGATGCC GACGCTTTCC
ACCGAGTTCT CCCTCTCGGC CGCCCAGAGC AGCCTGATTC TGTCAGTTGC CACGGCGATG
CTCGCCATCG GCCTGCTAAT CACCGGGCCG ATATCCGACC GGCTCGGGCG CAAGTCGGTG
ATGGTCATGG CGCTGTTCTG CGCGTCGCTG TTCACCATCG CCAGCGCGTT GATGCCCAGT
TGGGAAGGCG TGCTCATCAC ACGGGCACTG GTGGGCCTGT CGCTGAGCGG GCTGGCGGCG
GTAGCGATGA CCTACCTGAG CGAGGAAATA CACCCCACTC ACCTGGGCCT GGCGATGGGG
CTGTATATCG GTGGCAGCGC GGTCGGCGGA ATGAGCGGGC GGCTGATTGT CGGGGTCATG
ATCGATTATG TGAGCTGGCA CGCGGCGATG CTGGTGGTCG GCGGGCTGGC GCTGATCGCC
GCTGTGGTGT TCTGGAAGAT CCTCCCGGAG TCACGCAACT TCCGCCCCCG CTCGCTGCAC
CCGCGCAGCC TGCTGGACGG CTTTGTGGTG CAGTTCAAAG ACGCAGGGTT ACCGCTGTTG
TTTCTGATTG GCTTTCTGCT GATGGGCGCC TTCGTCACAC TGTTCAATTA CATCGCCTAC
CGCTTGTTGA GCGAGCCCTA CAACCTCAGC CAGGCCGTGG TCGGCGTGTT TTCCGTGGTG
TACCTGTCGG GCATCTACAG TTCGGCGAAG ATCGGCTCGC TGGCCGACCG GCTGGGTCGT
CGGAAAGTGC TCTGGGCCGT GATCGTGATG ATGCTGGCGG GCTTGATCAT GACGCTGTTC
ACACCACTGG CCCTGGTTAT CCCCGGTGTA TTGATCTTCA CCTTCGGCTT CTTCGGCGCG
CATTCAGTGG CCAGCAGCTG GGTAGGCCGC AGGGCCACAA CGGCAAGAGG TCAGGCTGCG
TCGCTGTACC TGTTCTGCTA TTACGCTGGC TCAAGCGTAG CCGGAACCGG CGGTGGCGTG
TTCTGGCATT ACGCGGGCTG GAACGGCATC GGGCTGTTTA TCGGGGCACT GTTACTGATG
GCGCTGGGCG TGGCGTTGAG GTTGGCGAGG TTGCAGCCGT TGGGGGCGAG GGTTTAG
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| Protein sequence | MNPAVAPPTT DLNTSAKPSG DSYIEKNTPL FKRTALALFA GGFSTFTLLY CVQPMMPTLS
TEFSLSAAQS SLILSVATAM LAIGLLITGP ISDRLGRKSV MVMALFCASL FTIASALMPS
WEGVLITRAL VGLSLSGLAA VAMTYLSEEI HPTHLGLAMG LYIGGSAVGG MSGRLIVGVM
IDYVSWHAAM LVVGGLALIA AVVFWKILPE SRNFRPRSLH PRSLLDGFVV QFKDAGLPLL
FLIGFLLMGA FVTLFNYIAY RLLSEPYNLS QAVVGVFSVV YLSGIYSSAK IGSLADRLGR
RKVLWAVIVM MLAGLIMTLF TPLALVIPGV LIFTFGFFGA HSVASSWVGR RATTARGQAA
SLYLFCYYAG SSVAGTGGGV FWHYAGWNGI GLFIGALLLM ALGVALRLAR LQPLGARV
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