| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5109 |
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| Symbol | |
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| ID | 1186794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5809171 |
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| End bp | 5809899 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637396429 |
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| Product | oxidoreductase, short chain dehydrogenase/reductase family |
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| Protein accession | NP_794841 |
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| Protein GI | 28872222 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01831] 3-oxoacyl-(acyl-carrier-protein) reductase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.409014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAT CGATACTGGT CACCGGCTCC AGCCGTGGCA TCGGCCGCGC CATTGCCTTG
CGTCTGGCCC GCGCTGGCTA CGACCTGGTC CTGCACTGCC GCACCGGTCG CAGCGAAGCA
GAAGCGGTGC AAGCCGAAAT CATCGCGCTG GGCCGTCAGG CGCGGGTGCT GCAATTCGAC
GTCTCGGACC GCGTCGCCTG CAAGGCGATT CTGGAAGATG ACGTGGAAAC CCACGGCGCG
TATTACGGCG TGGTGCTCAA TGCCGGTCTG ACCCGCGACG GCGCATTTCC GGCACTGAGC
GACGACGACT GGGATCAGGT GCTGCGCACC AACCTTGATG GCTTCTACAA CGTGCTGCAC
CCGCTGACCA TGCCGATGAT CCGTCGTCGC GCGGCGGGGC GTATCGTCTG TATCACTTCG
GTTTCAGGCC TGATCGGCAA CCGCGGCCAG GTGAACTACA GCGCGTCCAA AGCGGGCCTG
ATCGGTGCAG CCAAAGCGCT GGCCATCGAA CTGGGCAAAC GCAAGATTAC CGTCAATTGC
GTAGCGCCGG GGCTGATCGA CACCGCGATG CTCGACGAGA ACGTTCCCGT GGATGAACTG
ATGAAAATGA TCCCGGCGCA GCGCATGGGC ACTCCCGAAG AAGTCGCAGG CGCAGTGAAT
TTCCTGATGT CGGCGGAAGC CAGCTACATC ACCCGTCAGG TGCTGGCCGT CAATGGAGGG
TTGTGCTGA
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| Protein sequence | MTESILVTGS SRGIGRAIAL RLARAGYDLV LHCRTGRSEA EAVQAEIIAL GRQARVLQFD
VSDRVACKAI LEDDVETHGA YYGVVLNAGL TRDGAFPALS DDDWDQVLRT NLDGFYNVLH
PLTMPMIRRR AAGRIVCITS VSGLIGNRGQ VNYSASKAGL IGAAKALAIE LGKRKITVNC
VAPGLIDTAM LDENVPVDEL MKMIPAQRMG TPEEVAGAVN FLMSAEASYI TRQVLAVNGG
LC
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