Gene PSPTO_5091 details

Gene Information

• Locus tag: PSPTO_5091
• ID: 1186776
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 5793103
• End bp: 5793822
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637396411
• Product: hypothetical protein
• Protein accession: NP_794823
• Protein GI: 28872204

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATCACCT TCAATATTGC ACGATGGCAA GCCTGGGCAC CGGGCCTGGC GAGCGCGGAC 
GACTGGCGAC AATGGAGCCT GAACCCGACG CTGCTGGAAA CCAGTGACGC AGCGCCGGAC 
GTGTCTTTTC TTCCCGCCAT GCAACGCCGA CGGCTTGGTC GCATGGCGCG CATGGCGTTT 
GCGGTGGGCT GGCCATTGAC CGAAGGCTAC GGGCGCGTGC CGCTGGTGTT CGTCTCGCGC 
CACGGCGAAA CCCCGAGAAC ATTCGAAATT CTGCGTGACC TGGCCGCAGA AGAACCGCTT 
TCACCCACGC AATTCAGTTT GTCGGTACAT AACGCAGTGA TTGGTCTGTG GTCGATCATG 
CGTGGCGAAA CCAGTGAAAT GACGGCGTTG GCAGCCGCAG GCGATGGCCT GGAATATGGA 
GCATTCGAGG CAGCGGCGCT GCTGGCTGAA GGAGCCGAAG CCGTGCTGCT GGTGGTGACA 
GAAGAGCAAC CACCGCAAGC CTATGCCCAA TGGATTGATG ACGTGCCGTT CCCTTACGCC 
GTCGGCTTAC TGCTGACGCC CGGCAATGAA TGGCAATTGT CTCTGAACAC CGATACGCAA 
GGCACAGAGC GGACTCAGTG GCCCCATGCG CTGAACCTGC TGCAAGCCTT GCACACTGAT 
CAATCCGCCT GCCTGCACCC CTGGAATAAC CGGTTATGGA ACTGGCAACG CAACCACTGA 

 

Protein sequence

MITFNIARWQ AWAPGLASAD DWRQWSLNPT LLETSDAAPD VSFLPAMQRR RLGRMARMAF 
AVGWPLTEGY GRVPLVFVSR HGETPRTFEI LRDLAAEEPL SPTQFSLSVH NAVIGLWSIM 
RGETSEMTAL AAAGDGLEYG AFEAAALLAE GAEAVLLVVT EEQPPQAYAQ WIDDVPFPYA 
VGLLLTPGNE WQLSLNTDTQ GTERTQWPHA LNLLQALHTD QSACLHPWNN RLWNWQRNH