| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5086 |
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| Symbol | mdcB |
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| ID | 1186771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5788748 |
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| End bp | 5789623 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637396406 |
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| Product | 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme- A synthase |
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| Protein accession | NP_794818 |
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| Protein GI | 28872199 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1767] Triphosphoribosyl-dephospho-CoA synthetase |
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| TIGRFAM ID | [TIGR03132] triphosphoribosyl-dephospho-CoA synthase MdcB |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAC TTCAACGGAC ACCGCAACCC GCTTCGCTGG CCGAACGACT GGCCGATCTG
GCCGTCGATG CGTTGATCGA CGAAGCCGAT CTGTCGCCCA AGCCCGCGCT TGTGGACCGC
TGCAGCAATG GTGCGCACAC CGATTTGCAC CTGGGGCTGA TGCATTCTTC GGCGCTGTCG
CTGTGGCCGA CCTTCAAGTT GATGGCCGAC GCCGCCGCGC AATTCCAGGC AGTGGGCGAG
CCATTGCGGG AGGCGCTGGG GCGTCTCGGT CGTGAAGGTG AAGCCACGAT GCTGCGCACC
ACATCAGGCG TGAATACCCA CCGCGGTGCG ATCTGGGCGC TGGGCCTGCT GGTGACCGCC
GCCGCGCTCG ACCCGCAAGA CTGTGGGCCT GACGCAGTCT GCCAGCGCGC TGCCAGTCTG
GCGTTGATCA AGGATCGGCA GGTGCTTGCG CAAAACAGCC ATGGCAGTGA AGTGGTGCGT
CGTTATGGTG TCATGGGCGC CCGCGAGCAG GCCCAGCACG GCTTTCCTGC CGTTATCCGG
TGTGCCTTGC CGCAATTGCA ACGCAGCCGC GCAGCCGGCA GCGGCGAGCA GAACGCCCGG
CTGGATGCGC TATTGGCAAT CATGACCACC CTGGCCGACA CCTGCGTGCT GCATCGCGCC
GGTCTTGAAG GGCTGCAGAC CATGCAGAAC GGCGCACAGC GCGTGCTGGA CGCTGGCGGC
AGTGCCAGCC TGGCCGGTCG TCGCGCGCTG AACCAACTGG ATCAGCAACT GCTGGCCCTC
AACGCCTCGC CTGGCGGAGC GGCTGATCTG CTCGCCGCCT GCCTGTTTAT CGACGGCCTG
GAGCCTGCGC TCGGCCCTGT TTCGAGGAGT GCCTGA
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| Protein sequence | MSALQRTPQP ASLAERLADL AVDALIDEAD LSPKPALVDR CSNGAHTDLH LGLMHSSALS
LWPTFKLMAD AAAQFQAVGE PLREALGRLG REGEATMLRT TSGVNTHRGA IWALGLLVTA
AALDPQDCGP DAVCQRAASL ALIKDRQVLA QNSHGSEVVR RYGVMGAREQ AQHGFPAVIR
CALPQLQRSR AAGSGEQNAR LDALLAIMTT LADTCVLHRA GLEGLQTMQN GAQRVLDAGG
SASLAGRRAL NQLDQQLLAL NASPGGAADL LAACLFIDGL EPALGPVSRS A
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