| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5077 |
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| Symbol | |
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| ID | 1186762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5782307 |
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| End bp | 5782921 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637396397 |
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| Product | hemolysin III |
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| Protein accession | NP_794809 |
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| Protein GI | 28872190 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATTACG GAGAAAAATT CAACGCCTGG TCTCATTTGG TGGGCGCAGT GCTCGCCACC
GTCGGTGCGA TTTGGTTATT GGTGATAGCC AGCCTGCAGG GCGACGTCTG GAAAGTGGTC
AGCATGGCCA TTTATGGCGC GTGTCTGGTG ACGCTGTACA GCGTCTCGAC GGTGTACCAC
AGCGTCAAAG GCCGCTCGAA ATCGATCATG CAGAAGGTCG ATCACTTTTC GATCTACCTG
ATGATCGCTG GCAGTTACAC GCCGTTCTGC CTCGTGACAC TGCGCGGTGC GTGGGGCTGG
ACGTTGTTCG GTATCGTCTG GGGGCTGGCG CTGATCGGCA TTTTACAGGA GATAAAACCC
CGTTCCGAAG CGCGCATCAT GTCCATCGTG ATCTACGCGG TGATGGGCTG GATCGTGCTG
GTGGCCGTGA AACCGTTGAT CGCTGCGCTC GGCCTGGCGG GCTTCATCTG GCTGGCAGGC
GGCGGCGTGC TGTACACCGT CGGCATCCTG TTCTTCGCCT ACGACCAGAT CCGCCACTTT
CACGGCATCT GGCACCTGTT CGTGATTGGC GGCAGCTTGA TGCACTTCGT GGCGATTTGT
TTTTATGTGC TGTGA
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| Protein sequence | MYYGEKFNAW SHLVGAVLAT VGAIWLLVIA SLQGDVWKVV SMAIYGACLV TLYSVSTVYH
SVKGRSKSIM QKVDHFSIYL MIAGSYTPFC LVTLRGAWGW TLFGIVWGLA LIGILQEIKP
RSEARIMSIV IYAVMGWIVL VAVKPLIAAL GLAGFIWLAG GGVLYTVGIL FFAYDQIRHF
HGIWHLFVIG GSLMHFVAIC FYVL
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