Gene PSPTO_5071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5071 
Symbol 
ID1186756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp5776365 
End bp5776943 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content57% 
IMG OID637396391 
ProductYceI-like family protein 
Protein accessionNP_794803 
Protein GI28872184 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAGA AGTCTCTCGC CGCTCTGGCT CTGGGTACCG CACTGTTGTC TGCTGGCCAG 
GCCATGGCTG CCGACTACGT TATCGACAAG GAAGGCCAAC ACGCATTCGT TGACTTCAAG 
ATCAGCCACT TGGGCTACAG CTTCATCCAC GGTACATTCA AGGACTGGGA CGGCACGTTC 
AGCTTTGACG CTGCCAAGCC TGAAGCCAGC AAAATCAATG TCGAGCTGAA AACCGCCAGC 
CTGTTTACCA ACCACGCTGA ACGCGACAAG CACATCTCCA GCAAAGACTT CCTGGACGTT 
GCCAAATACC CTGAAGCGAA GTTCGTCTCT ACCGCTGTCA AATCGACCGG CGAGAAAACT 
GCTGATGTGA CCGGCGACCT GACCCTGCAC GGCGTGACCA AGCCCATCGT GATCAAGGCA 
ACCTTCAACG GCGAAGGCAA GGACCCGTGG GGCGGCTACC GTGCCGGCTT CAACGGTACT 
TCGACGCTGA ACCTGAACGA CTTCGGCATC AAAGGCCCTG GCCCGACGTC GCAGACCCTG 
GACCTGGACA TCACCTTCGA AGGCGTACAG AAGAAGTAA
 
Protein sequence
MLKKSLAALA LGTALLSAGQ AMAADYVIDK EGQHAFVDFK ISHLGYSFIH GTFKDWDGTF 
SFDAAKPEAS KINVELKTAS LFTNHAERDK HISSKDFLDV AKYPEAKFVS TAVKSTGEKT 
ADVTGDLTLH GVTKPIVIKA TFNGEGKDPW GGYRAGFNGT STLNLNDFGI KGPGPTSQTL 
DLDITFEGVQ KK