Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5067 |
Symbol | |
ID | 1186752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5770690 |
End bp | 5771085 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637396387 |
Product | 4-hydroxybenzoyl-CoA thioesterase domain protein |
Protein accession | NP_794799 |
Protein GI | 28872180 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTCC ACACCCGCAA ATGGGTCAAG CCCGAAGACC TCAACCCCAA CGGCACGTTA TTCGGCGGTA GCCTGCTGCG CTGGATCGAT GAGGAGGCGG CGATTTACGC GATTGTCCAG CTGGGCAATC AGCGCGTGGT GACCAAGTAC ATTTCCGAGA TCAACTTCGT CAGCGCTTCG CGTCAGGGCG ATATCATCGA GCTGGGCATC ACCGCCACCG AGTTCGGTCG CACCTCGATC ACCCTCAAAT GCCAGGTGCG CAACAAGATC ACCCGCAAGA GCATTCTGAC GGTCGAGAAG ATCGTCTTCG TCAACCTCGA CGAAGACGGC CAGCCCGCCC CGCACGGCCG GACTGAAATC CGCTACATCA AGGACCAGTT CGACGTAGAG GATTGA
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Protein sequence | MNFHTRKWVK PEDLNPNGTL FGGSLLRWID EEAAIYAIVQ LGNQRVVTKY ISEINFVSAS RQGDIIELGI TATEFGRTSI TLKCQVRNKI TRKSILTVEK IVFVNLDEDG QPAPHGRTEI RYIKDQFDVE D
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