Gene PSPTO_5060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5060 
Symbol 
ID1186745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp5763742 
End bp5764647 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content62% 
IMG OID637396380 
Productoxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor 
Protein accessionNP_794792 
Protein GI28872173 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGCA AAAATGTCGG CGTTATCGGC CTGGGTGCAA TGGGTCTGGG CATTGCCCGC 
TCGTTGCTGC GCAGCGGCTT CACTGTGCAT GCCTGCGATG TGCGCACCAG CGTGACCGAA 
GCGTTCGCCC AGGAAGGCGG TGTTGCCTGC CAATCCCCAG CCAGCATGGC CGCTGCCTGC 
GACGTGATCA TTACCGTTGT GGTCAATGCC GAGCAGACTG AAACTGTCCT GTTTGGTGAA 
AACGGCGCCA TCGCGGCCCT GCGTCCGGGC AGCCTGGTGA TCGGCTGCGC CACCGTGGCG 
CCGACTTTCG CTGTCGAGCT GGGTGAACGC CTGACCGCGC AGAACCTGCT GTACCTCGAC 
GCCCCGATCT CCGGCGGCGC AGCCAAGGCC GCTTCCGGCC AGATGACCAT GATGACCTCC 
GGCCCGAACG AGTCCTACGC CAAGGCCGAA GCCATCCTCA CTGGCATGGC CGGCAAGGTC 
TACCGCTTGG GCGACGTTCA CGGGCTGGGC TCGAAAGTCA AAATCATCAA CCAGTTGCTG 
GCCGGCGTGC ACATTGCTGC CAGTGCCGAA GCGATGGCGC TCGGCCTGCG TGAAGGCGTC 
GATGCGGACG CGCTGTACGA AGTGATCACC AACAGTGCCG GTAACTCGTG GATGTTCGAA 
AACCGCGTGC CGCACATCCT CAATGCCGAC TACACGCCGC TGTCGGCTGT GGATATCTTC 
GTCAAGGACC TGGGCCTGGT GCTGGATACC GCACGCAGCA GCAAATTCCC GCTGCCACTG 
TCGGCCACTG CGCACCAGAT GTTCATGCAG GCCTCCAGTG CCGGTTTCGG CCGCGAAGAC 
GACTCGGCGG TGATCAAGAT TTTCCCGGGC ATCGAATTGC CGAAAGCCAA GCCTGAAAAA 
GCCTGA
 
Protein sequence
MNSKNVGVIG LGAMGLGIAR SLLRSGFTVH ACDVRTSVTE AFAQEGGVAC QSPASMAAAC 
DVIITVVVNA EQTETVLFGE NGAIAALRPG SLVIGCATVA PTFAVELGER LTAQNLLYLD 
APISGGAAKA ASGQMTMMTS GPNESYAKAE AILTGMAGKV YRLGDVHGLG SKVKIINQLL 
AGVHIAASAE AMALGLREGV DADALYEVIT NSAGNSWMFE NRVPHILNAD YTPLSAVDIF 
VKDLGLVLDT ARSSKFPLPL SATAHQMFMQ ASSAGFGRED DSAVIKIFPG IELPKAKPEK 
A