| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5054 |
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| Symbol | |
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| ID | 1186739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5752893 |
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| End bp | 5754557 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637396375 |
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| Product | hypothetical protein |
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| Protein accession | NP_794787 |
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| Protein GI | 28872168 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGCC GCCAATCGAA AAGTCTAATC CGACCAAGCT TGAAGCCTTA TCTCGGGATA
GCTAGCGTAT TACTCATTCT CTGGACTGGA TTCGTCCTGT TTGTCTATTA CAAAACACAG
GAAAGCAACA TGAAACTCAT CGACATGGGC ACCGTGCTAC GCTGGAGCAT TGCAGTAGTT
TTAGGAACCG CACTACTAGC GTACAGCGGG CATTGGTGGG GCAAAGCCAT AGCCCATGAG
AGAGCCGAAC TTGTAGCGTA TAAAACCAAG ATAATGGCCC AAAATTCTGA ACAACAGGCT
ACGCAAAAAC GGACCTATGC GCTGGAAATA CGTGGGGTCG GGATTGGTAT CTATCACGAT
CACCAGTCTG AGATCTGGAA GCTCATAAAA AAGAAGAGTA ATAATTTTGT CTCAATATAC
TCCCGAGACC CGAAAGACTA TGATGCTTCT GTTGACTCGC GCGAAATAAG TAGAGACATT
AAAATCCAAG TAGCGTTCCA GCATTCTGCG GATGCTTCAG TAGCTTACTG GCCTATACCT
GTGTTTGCAA TTGTCCCACC CAAGCAACCG TCAGATGTTG GTGCTGCCGA TAATATTGTC
AATGGTAGGA ATGCAGCCAC CCTAGGGGTA ACTCTCTTTT TGTGGCAAGA CGCCGATAAC
ACCACACAAG CCCAAAGCAT GATTGAGCGT CTTTACAAAT TTTTTGATGA AAATCAGCAA
GTGCCTCAAG CATTGATTGT AAGTGAAGAT GGCGATGTCA CGCGAAATGG CCTGCGCGTG
GCAGGTACTC CTGGATTGCA ACACGGACAG GTTGTACCCA CAATCTACGA AAGTATGACT
GGATTGTTGG TCACTCGGTC AGATCGGGTG GATCGCTACA TTCGTCCCTA TGCCATTGAT
GAAACCGAAA ACAATCAGAA CAAAAACACA GATCTGGGAA AACTTTGGGC TTTTTACTGG
AATCGTGACG ACGCATTCAC GGAACAGTAT GAAAACGAAC AAAGCGCCAA AGGCGTTTTA
ATTCCCAAAT CCCCAGGCAC CATGTCCACC GCCTACTGGC AAGCCCAACT CCCCACCCTC
TGGAAAACCA TCAGCAACCG TGGCCCCGGC AATTTCGAGC CTTCCCCTTG GCTGCCCATC
CGCTGGGGGC AGCATCAGGT CAAGGAGTTC GACGCCGCGC CGGTGCTCGG CTACCTGCAT
CGCCCGATCA AGGCGCCCAT GCAGGATGAA AACGGCAAGC GCCTGAAACC TGCCTTGCAA
GCCAAAGCCC TGCAAGCCGC GTGGATGCAG GCGCTGGACA CTCTGCCCGA AGGTCAGAAA
CCTGTGCGGG TGTTCTACGA CAGCACCAAC AACCCGGAAG CCGAAATTGC TCTGAACAAT
GCACTGCACG ACCTGAACAA GGACGGCCAC GGCCTTGAAC TGGGCAACGT CGAAGAAGGC
TACGACATCG GTCGCCGTCT GGGTAATACC GGGGTCAGCG GTGCGCTGGT CGAGATCAAT
CTGGCGACCA TCGCCAGCTA CAAGGACGGC GGCGTCAGTG CGGTGGTCTA CGCAGGCACC
GATGGCAGCC TGACCGTACA AATGGTCCGC CCACCCGATG AAGCCCGCAA AGCGAAGAAC
AGCCAGAACC GTGGTGCCGA CCCGTTCACC TACGGCTCAC CCTAA
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| Protein sequence | MKGRQSKSLI RPSLKPYLGI ASVLLILWTG FVLFVYYKTQ ESNMKLIDMG TVLRWSIAVV
LGTALLAYSG HWWGKAIAHE RAELVAYKTK IMAQNSEQQA TQKRTYALEI RGVGIGIYHD
HQSEIWKLIK KKSNNFVSIY SRDPKDYDAS VDSREISRDI KIQVAFQHSA DASVAYWPIP
VFAIVPPKQP SDVGAADNIV NGRNAATLGV TLFLWQDADN TTQAQSMIER LYKFFDENQQ
VPQALIVSED GDVTRNGLRV AGTPGLQHGQ VVPTIYESMT GLLVTRSDRV DRYIRPYAID
ETENNQNKNT DLGKLWAFYW NRDDAFTEQY ENEQSAKGVL IPKSPGTMST AYWQAQLPTL
WKTISNRGPG NFEPSPWLPI RWGQHQVKEF DAAPVLGYLH RPIKAPMQDE NGKRLKPALQ
AKALQAAWMQ ALDTLPEGQK PVRVFYDSTN NPEAEIALNN ALHDLNKDGH GLELGNVEEG
YDIGRRLGNT GVSGALVEIN LATIASYKDG GVSAVVYAGT DGSLTVQMVR PPDEARKAKN
SQNRGADPFT YGSP
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