| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5051 |
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| Symbol | |
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| ID | 1186736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5750148 |
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| End bp | 5750741 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637396372 |
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| Product | Ham1 protein |
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| Protein accession | NP_794784 |
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| Protein GI | 28872165 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCTCA CCCAACTCGT ACTGGCCAGC CACAACGGCG GCAAACTCAA AGAACTTCAG
GCCATGCTCG GCGGCAGCGT GACGCTGCGC TCGGTCAGCG AGTTCAGCCT GGTGGAGCCG
GAAGAGACCG GCCTGTCGTT CGTCGAGAAC GCGATCCTCA AGGCGCGCAA TGCCTCACGC
CTGTCCGGCC TGCCCGCGCT GGCCGATGAC TCGGGGCTGG CGGTGGACTT TCTCGGCGGC
GCGCCTGGCA TCTATTCGGC ACGCTACGCC GATGGCCAGG GCGACGCGGC CAACAACGCC
AAGCTGCTGG AGGCGCTCAA AGACGTGCCG GACGAGCAGC GTGGCGCGCA GTTCGTTTGC
GTACTGGCGC TGGTGCGTCA CGCCGACGAC CCGTTGCCGA TCCTCTGCGA AGGCCTGTGG
CATGGGCGCA TCCTGCACGC TGCCAGCGGC GAGTACGGTT TTGGCTACGA TCCGCTGTTC
TGGGTGCCGG AGCGCAACTG CTCCAGCGCC GAACTCGGCC CGAGCGAGAA AAACCAGCTC
AGCCATCGCG CCCGAGCCAT GGTCCTGTTG CGCCAACGCC TGGGTCTGCA ATGA
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| Protein sequence | MNLTQLVLAS HNGGKLKELQ AMLGGSVTLR SVSEFSLVEP EETGLSFVEN AILKARNASR
LSGLPALADD SGLAVDFLGG APGIYSARYA DGQGDAANNA KLLEALKDVP DEQRGAQFVC
VLALVRHADD PLPILCEGLW HGRILHAASG EYGFGYDPLF WVPERNCSSA ELGPSEKNQL
SHRARAMVLL RQRLGLQ
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