Gene PSPTO_5050 details

Gene Information

• Locus tag: PSPTO_5050
• Symbol: metW
• ID: 1186735
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 5749494
• End bp: 5750114
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637396371
• Product: metW protein
• Protein accession: NP_794783
• Protein GI: 28872164
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis
• TIGRFAM ID: [TIGR02081] methionine biosynthesis protein MetW

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAGCCG ATCTGGAAAT CATCCAGGAA TGGATCCCCG CAGGCAGCCG TGTGCTCGAC 
CTCGGTTGCG GCGACGGCGA ATTGCTGACC TGGCTGCGTG ATCACAAGCA GGTCACCGGT 
TACGGGCTGG AAAACGACGC AGCCAACATC GCCGAATGCG TGGCCAAGGG CATTAACGTC 
ATCGAGCAGG ACCTCGACAA GGGGCTGGGC AACTTTGCCA GCAACAGCTT TGACGTGGTG 
GTCATGACCC AGGCCCTGCA AGCGGTGCAT TACCCGGACA GAATCCTCGA CGAGATGCTG 
CGCGTCGGAC GTCAGTGCAT CATCACCTTC CCGAACTTCG GCCATTGGCG CTGCCGCTGG 
TATCTGGCGA GCAAAGGCCG CATGCCGGTG TCGGATTTTC TGCCGTACAC CTGGTACAAC 
ACACCGAACA TCCACTTCTG CACCTTCGGC GACTTCGAAG AACTGTGCCG CGAGCGCGAC 
GCACAGGTGC TCGACAGGCT AGCCGTCGAT CAGCAGCACC GTCACGGCTG GGCCAGCAAA 
CTGTGGCCCA ATCTGCTCGG CGAAATCGGT ATCTACCGGG TCACCAGCCC AGGCCTGACG 
GACCACCAGA TTGCCATTTA A 

 

Protein sequence

MRADLEIIQE WIPAGSRVLD LGCGDGELLT WLRDHKQVTG YGLENDAANI AECVAKGINV 
IEQDLDKGLG NFASNSFDVV VMTQALQAVH YPDRILDEML RVGRQCIITF PNFGHWRCRW 
YLASKGRMPV SDFLPYTWYN TPNIHFCTFG DFEELCRERD AQVLDRLAVD QQHRHGWASK 
LWPNLLGEIG IYRVTSPGLT DHQIAI