Gene PSPTO_5048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5048 
Symbol 
ID1186733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp5747467 
End bp5748057 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content59% 
IMG OID637396369 
ProductYGGT family protein 
Protein accessionNP_794781 
Protein GI28872162 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.710638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGGAT TGAACACCGC TGCAATTTAC GTCCTGCAAA CGCTCGGCAG TCTGTACCTG 
CTGATCATCC TGTTGCGCTT CGTGCTGCAA CTGGTGCGGG CCAACTTCTA TAACCCGCTG 
TGCCAGTTCA TCGTGCGCGC CACCCAGCCG CTGCTCAAGC CTTTGCGACG CATCATTCCG 
AGCCTGTTCG GCCTGGACAT GTCGTCATTG GTGCTGGCGA TCATCGTGCA GATGATCCTG 
ATGGCGCTGA CCCTGCTGCT GATGTTCGGC ACCACCGGCG ACCCGCTGCA TTTGCTGCTC 
TGGTCGATTA TTGGCGTGAC GGCGCTGTTC CTGAAGATAT TCTTCTTTGC CCTGATCATC 
AGCGTGATCC TGTCGTGGGT CGCACCGGGC AGCCACAACC CTGGCGCAGA GCTGGTCAAC 
CAGATCTGCG AGCCCGCCCT GGCACCGTTC CGCAAGATCG TCCCGAACCT GGGCGGCCTG 
GATATCTCGC CGATCCTGGC ATTTCTGGTG CTCAAACTGC TCGACATGCT GGTCATCAAC 
AACCTCGCCG CCATGAGCAA CATGCCGGAC GTGCTGCGGT TGCTGATGTA A
 
Protein sequence
MIGLNTAAIY VLQTLGSLYL LIILLRFVLQ LVRANFYNPL CQFIVRATQP LLKPLRRIIP 
SLFGLDMSSL VLAIIVQMIL MALTLLLMFG TTGDPLHLLL WSIIGVTALF LKIFFFALII 
SVILSWVAPG SHNPGAELVN QICEPALAPF RKIVPNLGGL DISPILAFLV LKLLDMLVIN 
NLAAMSNMPD VLRLLM