| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5040 |
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| Symbol | pyrB |
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| ID | 1186725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5740872 |
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| End bp | 5741876 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396361 |
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| Product | aspartate carbamoyltransferase |
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| Protein accession | NP_794773 |
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| Protein GI | 28872154 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
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| TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCTC TCGACGCCAA GCGCCCGCTG CAGCTCAACC ATCAGGGCCA GCTGCGCCAT
TTTCTGTCTC TGGACGGCTT GCCCCGCGAG CTGCTAACCG AAATTCTTGA CACCGCCGAC
TCGTTCCTTG AAGTCGGCGC ACGGGCGGTG AAGAAGGTCC CGTTGTTGCG CGGCAAGACG
GTGTGCAACG TGTTCTTCGA AAACTCCACA CGCACCCGGA CCACTTTCGA ACTGGCGGCC
CAGCGGCTGT CGGCCGACGT GATCACCCTG AACGTCTCGA CTTCCTCTAC CAGCAAGGGC
GAAACACTGT TCGACACCCT GCGCAACCTT GAAGCAATGG CCGCCGACAT GTTCGTCGTG
CGCCACGCAG ACTCCGGCGC TGCGCACTTC ATTGCCGAGC ATGTGTGCCC GGACGTGGCG
ATCATCAACG GCGGTGACGG CCGACACGCG CACCCGACCC AGGGCATGCT CGACATGCTG
ACGATTCGTC GTCACAAGGG TGGCTTTGAA AACCTGTCGG TGGCCATCGT CGGCGACATC
CTGCACTCGC GGGTGGCGCG CTCCAACATG ATTGCACTCA AGGCGCTGGG CTGCCCGGAC
ATCCGCGTGA TCGGCCCGAA AACCCTGCTG CCGGTCGGCG TCGAGCAATA CGGGGTCAAG
GTCTACACCG ACCTCAACGA AGGTTTGAAG GACGTCGATG TGGTGATCAT GTTGCGCCTG
CAACGTGAGC GCATGACCGG TGGCCTGTTG CCCAGCGAAG GCGAGTTCTA CCGCTTGTTC
GGCCTGACCA CCGCGCGCCT GGCTGGCGCT AAACCGGATG CGATTGTGAT GCACCCCGGC
CCGATCAACC GAGGCGTGGA AATCGAATCG GCCGTCGCCG ACGGAGCACA CTCGGTGATT
CTCAACCAGG TGACTTACGG CATCGCGATC CGCATGGCAG TGCTGTCGAT GGCCATGAGC
GGACAAAACG CACAACGCCA ATTCGAACAG GAGAACGCCC AGTGA
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| Protein sequence | MTPLDAKRPL QLNHQGQLRH FLSLDGLPRE LLTEILDTAD SFLEVGARAV KKVPLLRGKT
VCNVFFENST RTRTTFELAA QRLSADVITL NVSTSSTSKG ETLFDTLRNL EAMAADMFVV
RHADSGAAHF IAEHVCPDVA IINGGDGRHA HPTQGMLDML TIRRHKGGFE NLSVAIVGDI
LHSRVARSNM IALKALGCPD IRVIGPKTLL PVGVEQYGVK VYTDLNEGLK DVDVVIMLRL
QRERMTGGLL PSEGEFYRLF GLTTARLAGA KPDAIVMHPG PINRGVEIES AVADGAHSVI
LNQVTYGIAI RMAVLSMAMS GQNAQRQFEQ ENAQ
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