| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5036 |
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| Symbol | |
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| ID | 1186721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5738123 |
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| End bp | 5739016 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396357 |
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| Product | tonB domain protein |
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| Protein accession | NP_794769 |
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| Protein GI | 28872150 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGAA ACGACCTGCC CCTCGAACTC GCCAATGTGG GTGTGCGTCC TGCCGATCGG
CTGGGCTTTA CCATGATGAT CGCTGCGCTG ATCCACCTCG CGGTGATCCT CGGCGTGGGC
TTCACCTATG TGAAGCCGGA ACAGATCTCG CAGACCCTGG AAATCACCCT CGCCACGTTC
AAGAGCGAAG AAAAGCCCAA ACAGGCCGAC TTTCTGGCCC AGGACGATCA ACAAGGCAGC
GGCACGCTGG ACAAGGCCGA AACGCTGAAG ACCACCGAGC TTGCGCCGTA TCAGGACACC
AAGGTCAATA AAGTCACGCC GCCACCGTCC AGCAAGCCGG TGGTCAAGCA GGAAGCGCCC
AAGACAGCCG TCGCGACCAC TGCGGCCAGC CCGCAGAAAA CCGTCGCCAA GCGCGACGAA
GTCAAGCCCG AGCCCACTAC CAAGGCCGCG CCGACCTTTG ACAGTTCGGA CCTGAGCAAC
GAAATCGCCA GCCTGGAAGC CGAACTCTCG ACCGAACAGC AGCTGTACGC CAAGCGCCCC
AAGATCCACC GCCTCAACGC CGCCTCGACC ATGCGCGACA AAGGTGCCTG GTACAAGGAC
GACTGGCGCA AGAAGGTCGA GCGAGTCGGT AACCTGAACT ATCCTGAGGA AGCTCGCCGC
AAGCAGATTT ACGGCAATTT GCGACTTCTT GTGTCGATCA ATCGGGATGG GTCGTTGTAC
GAAGTGCTGG TGCTGGAATC ATCAGGGCAA CCGTTGCTGG ACCAGGCCGC ACAGCGGATC
GTGCGTCTTG CTGCGCCTTT TGCGCCGTTC ACCGGCGATC TGGCAGACAT CGACCGGCTA
GAGATCATCC GCACCTGGAA ATTCGCACGC GGCGACAAGC TGTCCAGCAA CTGA
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| Protein sequence | MARNDLPLEL ANVGVRPADR LGFTMMIAAL IHLAVILGVG FTYVKPEQIS QTLEITLATF
KSEEKPKQAD FLAQDDQQGS GTLDKAETLK TTELAPYQDT KVNKVTPPPS SKPVVKQEAP
KTAVATTAAS PQKTVAKRDE VKPEPTTKAA PTFDSSDLSN EIASLEAELS TEQQLYAKRP
KIHRLNAAST MRDKGAWYKD DWRKKVERVG NLNYPEEARR KQIYGNLRLL VSINRDGSLY
EVLVLESSGQ PLLDQAAQRI VRLAAPFAPF TGDLADIDRL EIIRTWKFAR GDKLSSN
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