| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5024 |
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| Symbol | |
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| ID | 1186709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5719482 |
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| End bp | 5722886 |
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| Gene Length | 3405 bp |
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| Protein Length | 1134 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637396345 |
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| Product | potassium efflux system protein KefA, putative |
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| Protein accession | NP_794757 |
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| Protein GI | 28872138 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACCGG TGTCTATGTT TTCCCTGCGT TCCATTTGTG CTGCCGCACT GTTTGCGCTT
TGCCTGTCTA TCTTCCCGGC GCTGGCCGCC GAGCCGCCCA CCCGCGATGC CGTGCAGCAA
AGCCTCGACA AGATTGCCGA CCGCAAGCTG CCGGATGCCG ATCAGAAGGC CTTGCAGCAG
GTGCTTGAGC AGACGCTGGC GTTTCTCAAC AGCAAAGACG ACAGCGAGCA AAAGCTGACC
GCGCTCAAGC AGCAGCTGGC TCAAGCGCCA AAACAGACCT CGGACAACCA GCGCGAGCTG
GCCCGGTTGA AAGAAAGCAA AGTCGTTGCC GTTGCACAGC GCTACGGTGG CCTCGATGTG
CCGCAACTGG AGCAACTGCT CAGCCAGCGC AGCACCCAGC AAAGTGATCT GCAAAGCGAG
CTTAACGACG CCAACAGCCT GGCCATCACC GCGCAAACCC GGCCGGAGCG GGCGCAGACT
GAAATCAGCG CCAATCAGAC ACGCATCCAG CAGATCAATG CCATCCTCAA GAATGGCAAA
GACAACGGCA AGACCCTGAG TGCCGATCAG CGCAATCTGC TCAATGCGGA ACTGGCCTCG
ATCAACGCGC TGAACCTGCT GCGCCGTCAG GAACTGGCCG GCAACAGCCA GTTACAGGAC
CTGGGCAACA GCCAGCACGA CTTGCTGACC GAAAAAGTCG CCCGCCAGGA GCAGGAAATT
CAGGACCTGC AAACCCTGAT CAACGACAAG CGCCGAGCCC AGTCGCAGAA AACCGTGGCG
GACCTGTCTC TGGAAGCGCA GAAATCCGGT GGCAGCAGCC TCCTGGCGAC CGAGAGCGCC
GCCAACCTCA AGCTGTCCGA TTACCTGCTG CGCGGCACCG ACCGTCTCAA CGAGCTGACC
CAGCAAAACC TCAAGACCAA GCAGCAACTG GACAACCTGA CGCAGACCGA TCAAGCCCTC
AGCGAGCAGA TCAACGTGCT GAGCGGCAGC CTGCTGCTGT CCAAGATTCT CTACAAGCAA
AAACAGTCGT TGCCGCACCT GGAACTGGAC AAAGGCCTGG CTGACGAAAT CGCCAACATC
CGCCTTTATC AGTTCGACAT CAATCAGCAA CGCGAGCAGA TGAGCACACC GACCGCTTAC
GTCGAACGAC TGCTCGCCAC CCAGCCCCCG GAAAATATCA CCCCGCAACT GCGCAGGACG
CTGCTTGATC TGGCCATCAC CCGCAGCGAC CTGCTCGAAC GCCTGAACCG CGAGCTGAGC
GCGTTGCTCA ACGAGTCCAT CACGCTGCAA TTGAACCAGA AGCAGTTGAC CAGTACCGCC
GTCGGCCTGC GCTCCACGCT GGACGAGCAG ATGTTCTGGA TCCCCAGCAA CAAGCCGCTG
GATCTGGAGT GGTTCCAGAA CATCTGGCCG CGCCTGCAAA AACAGGTCGC GACCCTGCCC
TGGACGTCCA GCCTCAGCGA GCTGTCGGAC GGCTTGACAC AACGCCCGCT GCTGTTTCTG
CCATTGTTAC TGCTGATCGG TGTACTGACC TGGAGGCGCA AGGCGCTTTA CCAGAAGCTC
AACCGGCTGC ACGCCGACAT CGGCCACTTC AAACGCGACA GTCAGTGGAA AACCCCGTTG
GCGCTGCTGA TCAACGTGCT GCTGGCCATG CCGGTCGCAT TGGGGCTGGC GCTGTGCGGC
TACGCCTTGC AAATCGATGC GCGCGGGCAA AACGCCAACC TTGGCGAGGC CTTGCTGCAG
ATCGCGCTGG CCTGGCTAGT GTTCTACACC GCCTACCGCG TGCTGGCCCC GTCCGGCGTT
GCGCAACTGC ACTTTCGCTG GGAACCGGCG CAGGTCGCGT TCTTGCGCGG CTGGGTTCGT
CGCCTGGGGT TGGTGGTGCT GGCGCTGGTC GCCGTGGTGG CGGTCGCCGA GCATCAACCG
GCCGCGCTGG CCGACGACGT GCTGGGTATC GGCGTGGTGC TGACCTGTTA CGCGCTGATG
ACCTGGCTGC TGGGCCGATT GCTGCTCTCC AGCCCTACGC ACCACAACGC GTCGCTGTTC
CGCAAGACGC TGGGTGTGGC GTTCACGGCA TTGCCGGTCG CGCTGTTTCT GGCGGTGTGC
TTCGGCTACT ACTACACCGC ACTCAAGCTC AGCGACCGTC TGATCGACAC GCTGTACCTG
ATGATGATCT GGCTGATGGT CGAGGCCACC TTCGTTCGTG GTCTGGGCGT TGCCGCGCGG
CGACTGGCCT ACCAGCGTGC GCTGGCCAAA CGTCAGGCTG CGCGAGAAAA CGGTGACAGC
GACATCCCCG TCGAAGAACC GAAACTGGAC ATCGAACAGG TCAACCAGCA GTCGCTGCGC
CTGATTCGTC TGGCCTTGCT GGCTGGTTTC GTCGGCGCGT TGTACCTGGT CTGGGCCGAG
CTGATCACGG TGTTCGCCTA CCTGGACAAC ATCATCCTCT ACGAATACAC AAGCGGCACA
GGCGCCAACA TGAGCATGGT GCCGATCAGC CTGAGCGACT TCCTCGGTGC CGGGGTCATC
ATCGTCATTA CCTTTGTGCT GGCGGGCAAC CTGCCCGGCT TGCTCGAGGT GCTGGTTCTG
TCACGCATGA ACCTGGCGCA AGGCAGCGCC TATGCGACCA CCACGCTGCT CTCCTACACC
ATCGCCGGCA TCGGCTTTGT GACCACGCTG TCCACATTAG GCGTGAGCTG GGACAAGCTG
CAGTGGCTGG TCGCAGCGCT GTCGGTGGGC CTGGGGTTCG GCATGCAGGA GATCTTCGCC
AACTTCATTT CCGGCATCAT GATCCTCTTC GAGCGCCCGG TACGGATCGG CGACACCATC
ACCATCGGCG CCCTGTCGGG TACGGTCAGC AAGATCCGCA TCCGCGCCAC GACCATCACC
GACTTCGACC GCAAGGACAT TATCGTCCCG AACAAGACCT TCATCACCGG CCAGCTCATC
AACTGGTCAC TGACTGACAC CGTCACCCGC GTAACGCTCA AGCTGGGTGT GGATTACGGC
TCGGACCTGG ACCTCGTGCG CTCCCTGCTG CTGCAAGCCG CACGGGAAAA CCCTCGGGTG
CTCAAGGAGC CAGAGCCCAT TGTCTACTTC CTGAACTTCG GCGAAAGCAC CCTCGACCAC
GAACTGCGCA TGCACGTTCG CGACCTGGGC GACCGCAACC CGGTACTCGA CGAGATCAAC
CGCTTCATCA ACCGCGAGTT CAAGAAACAG CACATCAACA TCTCGTTCCG CCAGATGGAG
ATCTACCTCA AAAACACCCA GGGCCTGGAA TACAAACTGG TGCCCGCCGA ACCAGGCGAA
AAGCACGGCG CACCGGCTGG GCAAACCACG CTGCAACCGG TAAACACCAA AGTAGCCCCG
GCAACCAAAG ATGCGCCAGA GCCGCCGGAG TTGAGGCTGG ACTGA
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| Protein sequence | MRPVSMFSLR SICAAALFAL CLSIFPALAA EPPTRDAVQQ SLDKIADRKL PDADQKALQQ
VLEQTLAFLN SKDDSEQKLT ALKQQLAQAP KQTSDNQREL ARLKESKVVA VAQRYGGLDV
PQLEQLLSQR STQQSDLQSE LNDANSLAIT AQTRPERAQT EISANQTRIQ QINAILKNGK
DNGKTLSADQ RNLLNAELAS INALNLLRRQ ELAGNSQLQD LGNSQHDLLT EKVARQEQEI
QDLQTLINDK RRAQSQKTVA DLSLEAQKSG GSSLLATESA ANLKLSDYLL RGTDRLNELT
QQNLKTKQQL DNLTQTDQAL SEQINVLSGS LLLSKILYKQ KQSLPHLELD KGLADEIANI
RLYQFDINQQ REQMSTPTAY VERLLATQPP ENITPQLRRT LLDLAITRSD LLERLNRELS
ALLNESITLQ LNQKQLTSTA VGLRSTLDEQ MFWIPSNKPL DLEWFQNIWP RLQKQVATLP
WTSSLSELSD GLTQRPLLFL PLLLLIGVLT WRRKALYQKL NRLHADIGHF KRDSQWKTPL
ALLINVLLAM PVALGLALCG YALQIDARGQ NANLGEALLQ IALAWLVFYT AYRVLAPSGV
AQLHFRWEPA QVAFLRGWVR RLGLVVLALV AVVAVAEHQP AALADDVLGI GVVLTCYALM
TWLLGRLLLS SPTHHNASLF RKTLGVAFTA LPVALFLAVC FGYYYTALKL SDRLIDTLYL
MMIWLMVEAT FVRGLGVAAR RLAYQRALAK RQAARENGDS DIPVEEPKLD IEQVNQQSLR
LIRLALLAGF VGALYLVWAE LITVFAYLDN IILYEYTSGT GANMSMVPIS LSDFLGAGVI
IVITFVLAGN LPGLLEVLVL SRMNLAQGSA YATTTLLSYT IAGIGFVTTL STLGVSWDKL
QWLVAALSVG LGFGMQEIFA NFISGIMILF ERPVRIGDTI TIGALSGTVS KIRIRATTIT
DFDRKDIIVP NKTFITGQLI NWSLTDTVTR VTLKLGVDYG SDLDLVRSLL LQAARENPRV
LKEPEPIVYF LNFGESTLDH ELRMHVRDLG DRNPVLDEIN RFINREFKKQ HINISFRQME
IYLKNTQGLE YKLVPAEPGE KHGAPAGQTT LQPVNTKVAP ATKDAPEPPE LRLD
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