Gene PSPTO_5018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5018 
Symbol 
ID1186703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5708165 
End bp5709001 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content51% 
IMG OID637396339 
ProductISPsy9, transposase OrfB 
Protein accessionNP_794751 
Protein GI28872132 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTGA GGCCTTTGCA TTCTCTGGAC GGCCTGCTGA AGTTTGCCGG TCTGGCACGC 
AGCACTTTTT ACTATCAACA AAAGGTACTG CTGGCAGATG ACAAATACGC CGGGCTGAAA
GACCTGATTC AGGCAACTTT CTACGAGCAC AAGGGCCGGT ATGGCTATCG TCGCATCACG
GCAGCTTTGC GCAGGGCGGG CCATCTTGTG AACCACAAGA CGGTGCAGAA ACTAATGGGG
CAGCTAGGCC TGAAGAGCCT GATACGCGTG AAGAAATACC GTTCCTACAA AGGCGAAACA
GGCAAGGCCG CGCCTAACCT GCTAAAGCGT GATTTCAAAG CGCAATACCT TAACCAGAAA
TGGGCCACCG ACGTGACCGA ATTCAAAGTA GGAGGCCAGA AACTCTATCT GTCGCCGATC
ATGGATCTGT ACAGCGGCGA AATCATTTCC TATGCGATTG CCAGGCGCCC GCTGTACTCC
ATGGTCGACG AAATGCTTGA AGGAGCATTT AAGCGGCTTG GACCGCATGA AAAGCCGATT
TTGCATTCCG ACCAGGGCTG GCAATATCGG ATGCCTATTT ACCAGCGACT GCTCAATGAG
AATTCGATCA CAGCCAGCAT GTCGCGCAAG GGTAACTGCT ACGACAACGC GGCTATTGAG
AGTTTTTTTA GCACGCTGAA ATTCGAATTT TTCTACCTGA ACAAATTTAA CGATCTGGAT
GAGCTTCAAG CGGGTATCGA AGAGTACATT GAGTATTACA ATCACTCACG CATAAAACTG
AAGCTTAACG GCCTGAGTCC TGTGGAATAC AGAATGCAGG CCGCCAAGGC AGCGTAG
 
Protein sequence
MELRPLHSLD GLLKFAGLAR STFYYQQKVL LADDKYAGLK DLIQATFYEH KGRYGYRRIT 
AALRRAGHLV NHKTVQKLMG QLGLKSLIRV KKYRSYKGET GKAAPNLLKR DFKAQYLNQK
WATDVTEFKV GGQKLYLSPI MDLYSGEIIS YAIARRPLYS MVDEMLEGAF KRLGPHEKPI
LHSDQGWQYR MPIYQRLLNE NSITASMSRK GNCYDNAAIE SFFSTLKFEF FYLNKFNDLD
ELQAGIEEYI EYYNHSRIKL KLNGLSPVEY RMQAAKAA