Gene PSPTO_5013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5013 
Symbol 
ID1186698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5698372 
End bp5698896 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content58% 
IMG OID637396334 
Producthypothetical protein 
Protein accessionNP_794746 
Protein GI28872127 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCAT CCAGCCAGGC TCCACTCAAA TACCTGCAGG CCTACCCGCA GGCGCTGCAG 
GATCAGGTGC ATCAACTGAT CGCACAGGAT CGCCTGGCCG ATTACCTGCA ACAGCGTTAC
CCTGCGGGCC ATCAGATTCA GAGTGACAAG GCTCTTTACG CTTACGCACT GGCCCTCAAG
CAGGACCATC TGCGCAACGC GCCAGCCATC AAAAAGGTCC TGTTCGATAA CCGCCTGGAC
CTCACCCACC GCGCGCTCGG GCTGCACACC AAGATATCCC GAGTGCAGGG CGGCAAGCTC
AAGGCCAGTA ACGAGATCCG CGTGGCGGCC TTGTTCAAGG AAGCCCCGGC AGAATTTCTG
AAGATGATCG TGGTTCACGA ACTGGCGCAC TTTCGCGAGT CGGACCACAA CAAGGCGTTC
TACCAACTGT GCGAGCACAT GCTGCCCGGC TATCACCAGC TGGAATTCGA CCTGCGCGTT
TATCTGACCT ATAACGAGCT GCGAGCTTCA AGCGGCAAGT TTTGA
 
Protein sequence
MTASSQAPLK YLQAYPQALQ DQVHQLIAQD RLADYLQQRY PAGHQIQSDK ALYAYALALK 
QDHLRNAPAI KKVLFDNRLD LTHRALGLHT KISRVQGGKL KASNEIRVAA LFKEAPAEFL
KMIVVHELAH FRESDHNKAF YQLCEHMLPG YHQLEFDLRV YLTYNELRAS SGKF