Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5013 |
Symbol | |
ID | 1186698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5698372 |
End bp | 5698896 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637396334 |
Product | hypothetical protein |
Protein accession | NP_794746 |
Protein GI | 28872127 |
COG category | [R] General function prediction only |
COG ID | [COG1451] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGCAT CCAGCCAGGC TCCACTCAAA TACCTGCAGG CCTACCCGCA GGCGCTGCAG GATCAGGTGC ATCAACTGAT CGCACAGGAT CGCCTGGCCG ATTACCTGCA ACAGCGTTAC CCTGCGGGCC ATCAGATTCA GAGTGACAAG GCTCTTTACG CTTACGCACT GGCCCTCAAG CAGGACCATC TGCGCAACGC GCCAGCCATC AAAAAGGTCC TGTTCGATAA CCGCCTGGAC CTCACCCACC GCGCGCTCGG GCTGCACACC AAGATATCCC GAGTGCAGGG CGGCAAGCTC AAGGCCAGTA ACGAGATCCG CGTGGCGGCC TTGTTCAAGG AAGCCCCGGC AGAATTTCTG AAGATGATCG TGGTTCACGA ACTGGCGCAC TTTCGCGAGT CGGACCACAA CAAGGCGTTC TACCAACTGT GCGAGCACAT GCTGCCCGGC TATCACCAGC TGGAATTCGA CCTGCGCGTT TATCTGACCT ATAACGAGCT GCGAGCTTCA AGCGGCAAGT TTTGA
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Protein sequence | MTASSQAPLK YLQAYPQALQ DQVHQLIAQD RLADYLQQRY PAGHQIQSDK ALYAYALALK QDHLRNAPAI KKVLFDNRLD LTHRALGLHT KISRVQGGKL KASNEIRVAA LFKEAPAEFL KMIVVHELAH FRESDHNKAF YQLCEHMLPG YHQLEFDLRV YLTYNELRAS SGKF
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