| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5002 |
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| Symbol | waaC |
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| ID | 1186687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5681121 |
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| End bp | 5682185 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637396323 |
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| Product | lipopolysaccharide heptosyltransferase |
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| Protein accession | NP_794735 |
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| Protein GI | 28872116 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGGGTAC TGCTGATCAA GACGTCTTCA CTGGGTGATG TGATCCATGC CTTGCCGGCG
CTGACCGATG CGGCCCGGGC CTTGCCCGGC ATCCGCTTTG ACTGGGTGGT CGAGGAAGGT
TTCGCCGAAA TTCCCGCCTG GCATCCGGCG GTCGATGCGG TCATCCCGGT CGCGATCCGC
CGCTGGCGCA AAAACCTCTG GCAAACCTTC CGCTCAGGCG AATGGCGGCG CTTCAAGGCG
CGTGTCCGCG AGCAGCGTTA TGATCTGGTG ATCGACGCTC AAGGCCTGTT CAAGAGTGCC
TGGCTGACGC GCTACATTGA TGCGCCGGTG GCGGGTCTGG ACCGCGATTC GGCACGCGAG
CCGGTGGCCA GTCGCTTTTA TGACCGTGCC TTGCCGGTGG CACGCGGGCA GCATGCCGTC
GAACGGCTGC GTCAGTTGTT TGCCCAGGCG CTGGGCTATC CGCTGCCGTC CGGTATGGGC
GATTACGGGC TCAAGCCACT GGCGGCTCTG GACGACACGT TGCAGGCACC GTTTGTGCTG
TTTTTGCACG GTACAACGTG GGACACCAAG CATTGGCCCG AGCTTTACTG GCGTCAACTG
GCCGAATTGA TGGTCGCACG TGGCTTGCAT GTGCAGTTGC CGTGGGGCAA TCCGACCGAA
AAAGCGCGTG CCGAACGCAT CGCCGAAGGT CTGGAGAGCG CCCATGTGCT GCCGAAACTG
AACCTGGCGG GCGTCGCGCG GGTACTGGCC AGCGCGCAGG CCTGCGTAGC GGTCGATACC
GGCATCGGGC ACCTGGCCGC AGCGCTGGAT GTGCCGACTG TCTCTCTCTT CGGCCCGACC
AATCCGGGCC TGACCGGGGC CTACGGCAAG TCGCAGGTGC ATCTGGCCAG CGACTATCCG
GGCTGCACGC CGTGCCTGCA AAAGAAATGC ACCTACCAAC CGAGCGCCGA CGATCAGCGC
CGGTTCGACC TTAAGCGCGA GTGGCCGTTG TGCTTCACTC GCTTGAATCC CGAGCGAGTA
GCGAGCCAAC TGGGCGCGCT GTTGCTGGCA AAGGAACCTG GCTGA
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| Protein sequence | MRVLLIKTSS LGDVIHALPA LTDAARALPG IRFDWVVEEG FAEIPAWHPA VDAVIPVAIR
RWRKNLWQTF RSGEWRRFKA RVREQRYDLV IDAQGLFKSA WLTRYIDAPV AGLDRDSARE
PVASRFYDRA LPVARGQHAV ERLRQLFAQA LGYPLPSGMG DYGLKPLAAL DDTLQAPFVL
FLHGTTWDTK HWPELYWRQL AELMVARGLH VQLPWGNPTE KARAERIAEG LESAHVLPKL
NLAGVARVLA SAQACVAVDT GIGHLAAALD VPTVSLFGPT NPGLTGAYGK SQVHLASDYP
GCTPCLQKKC TYQPSADDQR RFDLKREWPL CFTRLNPERV ASQLGALLLA KEPG
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