| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5000 |
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| Symbol | waaP |
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| ID | 1186685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5679194 |
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| End bp | 5680000 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637396321 |
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| Product | lipopolysaccharide core biosynthesis protein WaaP |
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| Protein accession | NP_794733 |
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| Protein GI | 28872114 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTGT TCCTTGCTGA ACCGTTCAAG AGCCTGTGGG CCGGGCGCGA TGCATTCGCT
GAGGTCGAGG GCCTGAGCGG TGAGGTCTAC CGCGAGCTGG AAGGACGTCG CACGCTGCGC
ACCGAAGTTG ACGGGCGTGG CTACTTCGTC AAGATCCACC GCGGCATCGG CTGGGGCGAA
ATTGCCAAGA ACCTGGCAAC CGCCAAATTG CCGGTGCTGG GGGCAGGCAA GGAATGGGAC
GCCATCGAGC GTCTGCATGA GGTCGGTGTG CCGACCATGA CCGCTGTAGC GTACGGCGAG
CGTGGCAGCA ACCCCGCCGC GCAGCACTCG TTTATCGTCA CCGAAGAGTT GGCACCGACC
ACCAGCCTGG AGGACGTCAG CCTCAACTGG CGCACCGAGC CACCCGAGCC GCGCCTGAAA
AGGGCGTTCA TTGCCGAAGT CGCCAGACTG GTCGGGATGA TGCACCGGGC TGGCGTCAAC
CATCGCGATT GTTACATCTG TCATTTTCTG TTGCACACCG ACAAGCCGGT GACCGCTGAC
GATTTCAGGC TGTCGGTAAT CGATCTGCAC CGTGCCCAGA CGCGTCGGGC GATCACGCCA
CGCTGGCGCA ACAAGGACCT TGCGGCGCTG TACTTCTCGG CGCTGGACAT CGGCCTGACC
CGGCGCGACA AGCTGCGTTT TCTCAAGGAC TATTTTCAGC TGCCGCTACG CGAGATTCTG
CTCAAGGAAG CCGCGCTGCT GACCTGGCTG GATAAAAAAG CCGACAAGTT GTATCAGCGT
AAAGTGCGCT ACGGGGATGC GCTCTGA
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| Protein sequence | MKLFLAEPFK SLWAGRDAFA EVEGLSGEVY RELEGRRTLR TEVDGRGYFV KIHRGIGWGE
IAKNLATAKL PVLGAGKEWD AIERLHEVGV PTMTAVAYGE RGSNPAAQHS FIVTEELAPT
TSLEDVSLNW RTEPPEPRLK RAFIAEVARL VGMMHRAGVN HRDCYICHFL LHTDKPVTAD
DFRLSVIDLH RAQTRRAITP RWRNKDLAAL YFSALDIGLT RRDKLRFLKD YFQLPLREIL
LKEAALLTWL DKKADKLYQR KVRYGDAL
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