Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4991 |
Symbol | |
ID | 1186676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5664844 |
End bp | 5665974 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637396312 |
Product | glycosyl transferase, group 1 family protein |
Protein accession | NP_794724 |
Protein GI | 28872105 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACGCT CGGCTGATCG TCACGTGCTG CAGTTCTGCC ACGGCTATGA CGGGCCGTTT CTTGACTGCG CACGGCAATA CGCCAGCCTG TTTGTCGGCA AGGGCTATCG GGTGACGACG GTGTTTCTGA CCGGCGCCGC CGACCCCGAT GTGGTCGCCG ACTGCGGTTC GGACGAAGTG CTGTTCATGG AGTACAGCTC CAGTGCCATT CGCGGCCTGA AGCTGGGCGC TATCCGGGAC CTGTGCAAAA TCGCCGCCAC GCGCAGTTTC AGCTTCTGCA TCGCCCACCG TTTCAAACCG GTGTACATCG CCCTGCTGGC GACCAGCCTG CCGGTGATCG GCGTGCACCA TGCGTTCGGC GACTACAAAC GCCGTACGCG CAAACTGTTT GCTACGCTGT TTCGCAAGCG CCTGAGCCTG CTCGGCGTGT CCGATGCGGT GCGCGATGAC ATGCGCAGCA GCCTGCCCAA GTGGCCGGCC GAGCGCATTC AGACCCTGTA CAACCGCATT GATGTCGAGC AACTGCAGGG CAGTCAGTTT TCCGCTGAAG ATGCCCGCAC AGAGCTTGGC CTGTCGCCGT CGGCGTGGAT TGTCGGCAAC GTCGGTCGTC TGCATCCCGA CAAGGATCAG GCCACGCTGT TACGCGGTTT TGCCGAGGCG TTGCCCAGCC TTCCCGAGAA CAGCCAGTTG GTGCTTCTCG GCAAGGGTCG CCTGGATGAA ACCCTCAAGT CGCTCGCGCT GGAACTGGGC ATAGGCCCGC ATGTGCTGTT TCTCGGGCAG GTGCCTGACG CCCGCCGTTA CTTCAAGGCG TTCGACGTGT TCGCCTTGAG CTCGGATCAC GAGCCGTTCG GCATGGTGCT GCTGGAAGCG ATGGTGGCCG GTGTGCCGCT GGTTGCGACC TCGTGCGGCG GCGCGAAGGA AGTGGTGGAA GATGTCGGCC TGCTGTTCCC GCTGGGCGAT GCCCACAGCC TGGCGCATGG GCTGGTGCAC ATGGCCGGGC TTGACGTCGA GCAGCGTCAG GACTGCGCCG AGCGCATGCT GCTGCGCCTG CGCGAGCGTT TTTCCGATCA TGCGGTACGC GATGTCTTCT GGCGCTTGCC GCAAGTCTCC AGCCTGACAG CGGGGGCCTG A
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Protein sequence | MTRSADRHVL QFCHGYDGPF LDCARQYASL FVGKGYRVTT VFLTGAADPD VVADCGSDEV LFMEYSSSAI RGLKLGAIRD LCKIAATRSF SFCIAHRFKP VYIALLATSL PVIGVHHAFG DYKRRTRKLF ATLFRKRLSL LGVSDAVRDD MRSSLPKWPA ERIQTLYNRI DVEQLQGSQF SAEDARTELG LSPSAWIVGN VGRLHPDKDQ ATLLRGFAEA LPSLPENSQL VLLGKGRLDE TLKSLALELG IGPHVLFLGQ VPDARRYFKA FDVFALSSDH EPFGMVLLEA MVAGVPLVAT SCGGAKEVVE DVGLLFPLGD AHSLAHGLVH MAGLDVEQRQ DCAERMLLRL RERFSDHAVR DVFWRLPQVS SLTAGA
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