| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4981 |
|---|
| Symbol | |
|---|
| ID | 1186666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 5653359 |
|---|
| End bp | 5654174 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637396302 |
|---|
| Product | oxidoreductase, aldo/keto reductase family |
|---|
| Protein accession | NP_794714 |
|---|
| Protein GI | 28872095 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGA AAACCCTGCA TGACCTGCAT CGCCCGTTCG GCAGCACCGG CCTGAGCGTC
TCGCCGCTGG GCCTGGGCAC CGTCAAGCTT GGCCGCGACG TAGGTGTCAA ATACCCCAAC
GGCTTCAAGA TTCCAGACGA CCAGCAGGCA CAGATGCTAC TGCGCATGGC GCGTGACATG
GGCATCAACC TGATCGACAC CGCGCCGGCT TACGGCACCA GCGAAGAACG CCTCGGCCCG
TTGCTGCGCG GCCAGCGCCA GGAGTGGGTG ATTGTCAGCA AAGTGGGCGA AGAATTCGAC
AACGGTCAGT CGAGCCACGA CTTCAGCGCG GCGCACACGC GCAAGTCAGT GGAGCGCAGC
CTGAAACGTC TTGAAACTGA CTTTCTCGAT CTGGTGCTGG TGCATTCTGA CGGCAACGAT
CTGGCCATTC TCAACGACAC AGAGGTCTAC CAGACGCTCG CAGAGCTCAA GCGCGAAGGC
AAGATTCGCG GCTTCGGCTT CTCCGGCAAA ACTGTCGAAG GCGGCCTGCT GGCCTTGCGC
GACGGGGATT GCGCGATGGT CACCTACAAC CTCGACGAAC AGGGTGAAAA ACCTGTCGTG
GACTACGCTG CCGAGCACGG CAAAGGCATT CTGGTCAAGA AAGCGCTGGC CAGCGGGCAT
GCCTGCCTGA CGCCGGGGAT CGACCCGGTG CAGGCCAGCT TCCAGCTTCT GTTTGAACAT
CCCGGGGTTG CCAGTGCTAT TGTCGGCACC ATCAACCCAT TGCACCTGGC CCATAACGTC
GCCACTGCCG CTGCCGTGAT TTGCCGTCAA GCCTGA
|
|---|
| Protein sequence | MSLKTLHDLH RPFGSTGLSV SPLGLGTVKL GRDVGVKYPN GFKIPDDQQA QMLLRMARDM
GINLIDTAPA YGTSEERLGP LLRGQRQEWV IVSKVGEEFD NGQSSHDFSA AHTRKSVERS
LKRLETDFLD LVLVHSDGND LAILNDTEVY QTLAELKREG KIRGFGFSGK TVEGGLLALR
DGDCAMVTYN LDEQGEKPVV DYAAEHGKGI LVKKALASGH ACLTPGIDPV QASFQLLFEH
PGVASAIVGT INPLHLAHNV ATAAAVICRQ A
|
|---|
| |