Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4979 |
Symbol | |
ID | 1186664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5651806 |
End bp | 5652138 |
Gene Length | 333 bp |
Protein Length | 110 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637396300 |
Product | multidrug resistance protein |
Protein accession | NP_794712 |
Protein GI | 28872093 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCTT ATTACCTGTT GGCCATCGCC GTTTGCGCGG AAGTCATCGC CACCACGTCC ATGAAGGCCG TCAAGGGATT GAGCACGCCC CTGCCTCTGA TATTGCTGAT CACCGGCTAC GCCATTGCGT TCTGGATGCT GATTCTGGTG ATGCGCACGA TCCCGGTCGG TATCACGTAC GCCATCTGGT CAGGCATGGG CATCGTCATG GTCAGCGTCG CGGCGTACTT TATTTACGGC CAGAAACTCG ACCTGCCCGC ACTGCTCGGC ATGGGGATGA TTGTCGCCGG GGTCGCGGTC ATTCAGCTGT TCTCGAAAAC CGCCGGGCAT TGA
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Protein sequence | MNAYYLLAIA VCAEVIATTS MKAVKGLSTP LPLILLITGY AIAFWMLILV MRTIPVGITY AIWSGMGIVM VSVAAYFIYG QKLDLPALLG MGMIVAGVAV IQLFSKTAGH
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