Gene PSPTO_4979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4979 
Symbol 
ID1186664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5651806 
End bp5652138 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content58% 
IMG OID637396300 
Productmultidrug resistance protein 
Protein accessionNP_794712 
Protein GI28872093 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCTT ATTACCTGTT GGCCATCGCC GTTTGCGCGG AAGTCATCGC CACCACGTCC 
ATGAAGGCCG TCAAGGGATT GAGCACGCCC CTGCCTCTGA TATTGCTGAT CACCGGCTAC
GCCATTGCGT TCTGGATGCT GATTCTGGTG ATGCGCACGA TCCCGGTCGG TATCACGTAC
GCCATCTGGT CAGGCATGGG CATCGTCATG GTCAGCGTCG CGGCGTACTT TATTTACGGC
CAGAAACTCG ACCTGCCCGC ACTGCTCGGC ATGGGGATGA TTGTCGCCGG GGTCGCGGTC
ATTCAGCTGT TCTCGAAAAC CGCCGGGCAT TGA
 
Protein sequence
MNAYYLLAIA VCAEVIATTS MKAVKGLSTP LPLILLITGY AIAFWMLILV MRTIPVGITY 
AIWSGMGIVM VSVAAYFIYG QKLDLPALLG MGMIVAGVAV IQLFSKTAGH