| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4978 |
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| Symbol | kdtA |
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| ID | 1186663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5650394 |
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| End bp | 5651737 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637396299 |
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| Product | 3-deoxy-D-manno-octulosonic-acid transferase |
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| Protein accession | NP_794711 |
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| Protein GI | 28872092 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGAA CTCTTTATAC CGTGCTGTTT CATCTGGGCC TGCCCTTGGT CGCCCTGCGC
CTGTGGTTGC GCGCGCGCAA GGCCCCGGCG TATCGCCAGC GCATCGGCGA GCGTTTCGCC
AGTGGCCTGC CTGCCATGCA GCGCGACGGC ATCTGGGTGC ATGCGGTGTC GGTGGGCGAG
AGCATCGCCG CTGCGCCGAT GATTCGTGCG CTGCTGGTAC AGTATCCGCA ACTGCCGATC
ACTGTGACTT GCATGACGCC CACAGGTTCG GAGCGAATCA AGGCGCTGTT CGCCAACGAG
CCGCGCATTC AGTACTGTTA CCTGCCGTAT GACCTGCCGT GGGCCGCCGG GCGTTTTCTC
GATCATGTGC AGCCGCAGTT GGGCATCATC ATGGAAACCG AGTTGTGGCC CAACCACATT
CATCAATGTG CGAAACGCGC AATTCCCGTG GTGCTGGCCA ATGCTCGACT GTCGGAACGT
TCGGCGCGGG GCTATGCCCG TTTCGCCAGG CTGACGCAGC CGATGCTGGC TGAAATGGCC
TGGTTTGCGG TGCAGACTGA AGTGGAAGCG CAGCGCTTTC GTGATCTGGG TGCGCGAGCG
GAGTGTGTTG TGGTGACGGG CTCGATCAAG TTCGACCTGA ACATCGACCC GCAGCTGCTG
GAGCGCGCTG CGCAATTGCG CGAGCAATGG CAGGCGACGC AGCGCCCGGT GTGGATCGCA
GCCAGTACCC ATGCGGGCGA GGATGAAAGC GTTCTGTCCG CTCATCGCAC TTTGCTGGCC
AGCCATCCCG ATGCGCTGTT GATTCTGGTG CCGCGCCATC CCGAGCGTTT CGACAGCGTG
CATGCGCTGT GTCAGCAGCA GGGCTTCAAA ACGGTTCGGC GCTCTTCCGC GCAGGCCGTC
ACGCCAGATG TTGCGGTGCT GATGGGCGAT ACCATGGGCG AGTTGCTGTT TCTCTATGCG
CTGGTCGACA TCGCCTTCGT CGGCGGCAGC CTGGTGCCCA ACGGCGGGCA CAACCTGCTG
GAGCCCGCGG CGCTGGCCAA GCCCGTACTG AGCGGCCCGC ACCTGTTCAA CTTCCTCGAG
ATCGCCGCAA TGTTGCGCAC TGCCGGTGCG TTGCAAGAGG TCAGCGATGC GACCGCGCTA
GCCACTGCGG TGCAGCGCCT GATCGACCAG CCACAACAGG CTCGCAGTAT GGCCGATGCC
GGGCTGGCAG TGATGAAGGC CAATCAGGGT GCGCTGCAAC GCTTGCTGGA CGGAATCGAG
CGGTTGATGG CCAAACGCCG AGTCGCGGAG GACGCAGAGC GTCCAGAACG GCATGCCCAC
GCAGAGCGTC GGCACGATAG TTGA
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| Protein sequence | MNRTLYTVLF HLGLPLVALR LWLRARKAPA YRQRIGERFA SGLPAMQRDG IWVHAVSVGE
SIAAAPMIRA LLVQYPQLPI TVTCMTPTGS ERIKALFANE PRIQYCYLPY DLPWAAGRFL
DHVQPQLGII METELWPNHI HQCAKRAIPV VLANARLSER SARGYARFAR LTQPMLAEMA
WFAVQTEVEA QRFRDLGARA ECVVVTGSIK FDLNIDPQLL ERAAQLREQW QATQRPVWIA
ASTHAGEDES VLSAHRTLLA SHPDALLILV PRHPERFDSV HALCQQQGFK TVRRSSAQAV
TPDVAVLMGD TMGELLFLYA LVDIAFVGGS LVPNGGHNLL EPAALAKPVL SGPHLFNFLE
IAAMLRTAGA LQEVSDATAL ATAVQRLIDQ PQQARSMADA GLAVMKANQG ALQRLLDGIE
RLMAKRRVAE DAERPERHAH AERRHDS
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