| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4975 |
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| Symbol | |
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| ID | 1186660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5645168 |
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| End bp | 5646457 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396296 |
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| Product | cytosine/purine/uracil/thiamine/allantoin permease family protein |
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| Protein accession | NP_794708 |
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| Protein GI | 28872089 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1457] Purine-cytosine permease and related proteins |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family
[TIGR02358] probable hydroxymethylpyrimidine transporter CytX |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACACAC CCGGCACCTA TTCCCCCGAT ACCCCCATCC CCGCCAGCCA GCGGGTGTTC
GGCGGGCGGG ACCTGTTTTC TCTGTGGTTT TCCCTTGGCA TCGGCCTGAT GGTGCTGCAG
ACCGGGGCCT TGCTGGCGCC GGGGTTGGGC ATGTCCGGCT CGATGCTGGC GATTTTTCTG
GGCACGCTGG TCGGGGTTCT GCTGCTCGCC AGCGTGGCCG TGATCGGCAG TGACACCGGT
TTGTCATCCA TGGCCGCGCT CAAGCTCAGC CTGGGCAGCA AAGGCGCGTC GCTGCCGGCG
GTGTTGAACC TGCTGCAACT GATCGGCTGG GGCTCGTTCG AGATCATCGT CATGCGCGAT
GCCGCCAGTC TGTTGGGCGC TCGTGCTTTT GCAAACGAAA GCCTCTGGGC TAACCCGGTG
CTGTGGACAC TGTTGTTCGG CGCGCTGGCG ACGCTGTTGG CTATCAGCGG GCCGTTGACC
TTCGTGCGCC GGTTTCTGCG TCAATGGGGG CTATGGATTC TGCTGGCCGC CTGCTCGTGG
CTGACCTGGA ACCTGCTTGC CAAGGCCGAT CTCGCAACCT TGTGGTCGAC CTCCGGCGAT
GGAACCATGC AGTTTGCCTC GGGTTTCGAC ATTGCCATCG CCATGCCGCT TTCCTGGCTG
CCGCTGATTG CCGATTACTC GCGCTTCGGC CGACGCGCGA AAAGTGTCTT TGGCGGCACT
GCTGTGGGCT TTTTCATCGG TAATGCCTGG CTGATGAGCC TGGGCGTTGC CTACACGCTG
GCGTTCGCGC CGAGTGGCGA GATCAATGCG TTGCTGCTGG CACTGGCGGG CGCGGGGCTG
GGGATCCCCT TGCTGTTGAT TCTGCTGGAT GAAACCGAAA ACGCATTCGC CGACATTCAC
TCGGCGGCGG TATCCAGTGC GCTGCTGACA CGCCTCAACG TTGAGCATCT GGCGTTGGTG
ATTGGCGTGA TCTGCACTTT GATCGCCTGC CTGGCACCGT TGGCCCAATA CCAGAACTTC
CTGTTGCTCA TCGGCTCGGT GTTTGCGCCG CTATTCGGCG TGGTGCTGGT CGACCATTTC
ATTCTGCGGC GTCGCAGTGG TCAGATTGCG CAGGGCGGTT TGCGCTGGAT GAGTCTGCTG
GCATGGCTTG GCGGCATCAG CACCTACCAC TTGCTGGCCA ATCTTTATCC GCAGATTGGC
GCAACACTGC CAGCGCTCAT CGTCGCTGGC GTGTTGCAAC TGTTGATCGG CAGCGCAATC
AGCCGCGGCC GGGGAACAGT TCCGGCTTGA
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| Protein sequence | MNTPGTYSPD TPIPASQRVF GGRDLFSLWF SLGIGLMVLQ TGALLAPGLG MSGSMLAIFL
GTLVGVLLLA SVAVIGSDTG LSSMAALKLS LGSKGASLPA VLNLLQLIGW GSFEIIVMRD
AASLLGARAF ANESLWANPV LWTLLFGALA TLLAISGPLT FVRRFLRQWG LWILLAACSW
LTWNLLAKAD LATLWSTSGD GTMQFASGFD IAIAMPLSWL PLIADYSRFG RRAKSVFGGT
AVGFFIGNAW LMSLGVAYTL AFAPSGEINA LLLALAGAGL GIPLLLILLD ETENAFADIH
SAAVSSALLT RLNVEHLALV IGVICTLIAC LAPLAQYQNF LLLIGSVFAP LFGVVLVDHF
ILRRRSGQIA QGGLRWMSLL AWLGGISTYH LLANLYPQIG ATLPALIVAG VLQLLIGSAI
SRGRGTVPA
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