| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4960 |
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| Symbol | parC |
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| ID | 1186645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5623783 |
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| End bp | 5626038 |
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| Gene Length | 2256 bp |
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| Protein Length | 751 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396281 |
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| Product | DNA topoisomerase IV, A subunit |
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| Protein accession | NP_794693 |
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| Protein GI | 28872074 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACT CCCTTGACCT CAGCCTGGAC GGCGTAGAAC GCCGATCACT GGCTGACTTC
ACCGAACAGG CCTACCTCAA CTACTCCATG TACGTGATCA TGGACCGTGC CTTGCCGCAC
ATCGGCGACG GCCTGAAACC GGTACAGCGG CGCATCATCT ACGCGATGAG CGAGCTGGGC
CTGGGGGCCG ACGCCAAGCA CAAGAAGTCG GCGCGTACCG TCGGTGATGT TCTCGGCAAG
TTCCATCCGC ACGGCGATTC GGCCTGCTAC GAAGCCATGG TGCTGATGGC TCAGCCGTTC
AGCTATCGCT ACACGCTGGT AGACGGGCAG GGTAACTGGG GTGCGCCGGA TGATCCCAAG
TCCTTCGCTG CCATGCGTTA CACCGAGGCG CGCCTGTCGC GCTACTCCGA AGTGTTGCTC
AGCGAACTGG GTCAGGGGAC CGCGGACTGG GTGCCGAACT TTGACGGCAC GCTCGACGAG
CCCGCAGTGT TGCCTGCACG GTTGCCGAAT ATTCTGCTCA ACGGCACCAC CGGTATCGCC
GTCGGCATGG CCACTGATGT TCCGCCGCAC AACCTGCGCG AAGTTGCCAG CGCCTGCGTG
CATCTGCTCG ACGAGCCCAA GGCCACGATT CCAGAGCTGT GCGAGCATAT TCTGGGGCCG
GATTATCCGA CCGAAGCCGA GATCATCACG CCGCGTGCCG ACCTGCTGAA AATCTATGAA
ACCGGTCGTG GTTCGGTGCG TATGCGTGCC GTGTACCGCA TCGAAGATGG CGATATCATC
GTCACGTCGC TGCCGCATCA GGTTTCCGGT GCCAAGGTGC TGGAGCAGAT CGCCGCGCAG
ATGCAGGCCA AGAAACTGCC GATGGTTGCC GACTTGCGTG ACGAGTCGGA CCACGAAAAC
CCTTGCCGCA TCGTGATCAT CCCGCGCTCC AACCGGGTTG AGCTGGACGA ACTGATGCAG
CATCTGTTCG CGACCACGGA GCTTGAATCC AGTTATCGGG TCAACATCAA CATCATTGGC
CTGGACGGCA AACCGCAGCT CAAGAACCTC AAGACGCTGC TCAGCGAATG GCTGACGTTC
CGTATCGGCA CTGTGCGTCG TCGTTTGCAA TTTCGTCTGG ACAAGGTCGA GCATCGCCTG
CACCTGTTGG ACGGTTTGCT CACGGCTTAC CTGAATCTGG ATGAGGTGAT CCACATCATC
CGTACCGCCG AACATCCCAA GGCGGAGCTG ATTGCGCGTT TCGGTCTCTC GGAAATTCAG
GCTGACTACA TCCTCGACAC CCGCCTGCGC CAATTGGCAC GTCTGGAAGA GATGAAGCTG
CGCAGCGAGC AGGATGCCCT GCGTAAAGAG CAGGCCAAGC TTCAGGCGTT GCTGGGCAGT
GAATCCAAAC TGCGCAAGCT GGTGCGCGCC GAGCTGATCG CCGACGCTGA AACCTATGGT
GATGACCGTC GTTCGCCGAT CGTTGCCCGC GCCGAAGCCA AGGCGCTGTC TGAAAACGAA
TTGATGCCCA CTGAGCCGGT GACCGTCGTG CTGTCGGAAA AAGGCTGGGT GCGTTGCGCC
AAAGGTCATG ACATCGATGC CACCGGGCTT TCCTATAAAG CCGGAGATGG CTTCAAGACG
TCGGCCATTG GCCGTTCCAA CCAGTTTGCG GTGTTCATCG ACTCGACCGG ACGCAGCTAT
TCGGTTGCCG CGCACACCCT GCCGTCCGCA CGGGGGCAGG GCGAGCCGTT GACCGGCAAG
TTGCAACCGC CACCGGGCGC GACCTTTGAA TGTGTGTTGC TGCCCGAAGA CGACGCGCTG
TATGTGATCG CCTCCGATGC CGGTTACGGT TTTGTGGTCA AGGGTGAAGA CCTGCAAGCC
AAGAACAAGG CCGGCAAGGC GCTGTTGAGC TTGCCGGGCG GGGCGAAAGT TATTCTGCCG
CGCCCCGTGG CTGACCGTGA GCTGAACTGG CTGGCGGCGG TGACCACCGA AGGTCGCCTG
CTGGTCTTCA AAGTCAGCGA TTTGCCGCAA CTGGGCAAAG GCAAGGGCAA CAAGATCATC
GGCATTCCGG GCGAACGGGT CGCCAGTCGT GAAGAATATG TAACCGATCT GGCAGTGATC
GCACAGGGCG CTACGCTTGT GCTTCAGGCG GGCAAACGAA CGCTGTCGCT CAAGCCTGAA
GACCTCGAAC ATTACAAGGG AGAGCGCGGT CGCCGTGGCA ATAAACTGCC AAGGGGCTTC
CAGCGGGTCG ACGCATTATT GGTGGAAAAT AGCTGA
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| Protein sequence | MSDSLDLSLD GVERRSLADF TEQAYLNYSM YVIMDRALPH IGDGLKPVQR RIIYAMSELG
LGADAKHKKS ARTVGDVLGK FHPHGDSACY EAMVLMAQPF SYRYTLVDGQ GNWGAPDDPK
SFAAMRYTEA RLSRYSEVLL SELGQGTADW VPNFDGTLDE PAVLPARLPN ILLNGTTGIA
VGMATDVPPH NLREVASACV HLLDEPKATI PELCEHILGP DYPTEAEIIT PRADLLKIYE
TGRGSVRMRA VYRIEDGDII VTSLPHQVSG AKVLEQIAAQ MQAKKLPMVA DLRDESDHEN
PCRIVIIPRS NRVELDELMQ HLFATTELES SYRVNINIIG LDGKPQLKNL KTLLSEWLTF
RIGTVRRRLQ FRLDKVEHRL HLLDGLLTAY LNLDEVIHII RTAEHPKAEL IARFGLSEIQ
ADYILDTRLR QLARLEEMKL RSEQDALRKE QAKLQALLGS ESKLRKLVRA ELIADAETYG
DDRRSPIVAR AEAKALSENE LMPTEPVTVV LSEKGWVRCA KGHDIDATGL SYKAGDGFKT
SAIGRSNQFA VFIDSTGRSY SVAAHTLPSA RGQGEPLTGK LQPPPGATFE CVLLPEDDAL
YVIASDAGYG FVVKGEDLQA KNKAGKALLS LPGGAKVILP RPVADRELNW LAAVTTEGRL
LVFKVSDLPQ LGKGKGNKII GIPGERVASR EEYVTDLAVI AQGATLVLQA GKRTLSLKPE
DLEHYKGERG RRGNKLPRGF QRVDALLVEN S
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