| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4955 |
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| Symbol | |
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| ID | 1186640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5615789 |
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| End bp | 5617630 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396276 |
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| Product | rhodanese domain protein/phosphatidylserine decarboxylase |
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| Protein accession | NP_794688 |
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| Protein GI | 28872069 |
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| COG category | [I] Lipid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase
[COG2897] Rhodanese-related sulfurtransferase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCAT TCACTGGCTT GTCGCTGGTC ATCGAACCCA ACGATCTGCT TGAGCGTCTC
GACGCCCCTG AACTGATTCT CGTGGATCTG ACCAGCAGCG CTCGCTACGA AGCCGGGCAT
ATTCGCGGCG CTCGCTTCGT CGACCCGAAA CGTACGCAAC TGGGCAAGCC ACCGGCGCCC
GGCCTGCTAC CGGACACGGC CGACCTGGAG CAGTTGTTCG GCGAGCTGGG CCACAACCCC
GATGCGGTCT ACGTTGTCTA CGATGACGAG GGCGGTGGCT GGGCCGGGCG TTTCATCTGG
TTGCTGGATG TCATCGGCCA TAGCGGCTAC CACTATCTGG ACGGCGGCGT GCTGGCCTGG
GAAGCGCAAG CACTGCCATT GAGCACCGAG GTGCCGCCGG TTGCTGGCGG CCCGGTTGCG
CTGACACTGC ACGACGAACC CACCGCCACC CGTGAATACC TGCAGAGCCG CCTGGGCGCA
GATGACCTGG CAATCTGGGA CGCACGCGCA CCTACCGAAT ATTCGGGCGA AAAAGTGGTC
GCCGCCAAAG GTGGACACAT TCCCGGCGCA GTCAACTTCG AGTGGACGGC GGGCATGGAC
AAAGCGCGCA ACCTGCGCAT TCGTCAGGAC ATGCCGCAGA TTCTGCAAGA CCTGGGCATC
ACGCCTGACA AGGAAGTGAT CACCCATTGT CAGACTCACC ACCGCTCGGG CTTCACCTAT
CTGGTGGCCA AGGCGCTGGG CTACCCAAGG GTCAAGGCTT ACGCCGGCTC GTGGGGAGAA
TGGGGCAATC ATCCTGATAC GCCGGTTGAA GTACCCACCG TGGCCGTTGC ACCCATTGAA
ACGGCTGAGG TCATTGAACC GGCAGCGCCT GTCCAGCCAG CCGGAACCAT TGAGCCTGTT
CGCGCCACTG AATGGAGTAA GGGTTCTCAA AAATTTTCAG GACATTCATC TTCAGGACAC
TCATCTTCAG GACCCTCAAT GAAAGACCGC TTGTTTATTC TCAGTCAGCA CCTGTTGCCG
CACCATCTGC TGTCCCGCCT GGCCGGCTGC GTTGCCGAAT GCCGCGTGCG CTGGTTCAAG
AACGCGTTTA CAGCGTGGTT CGCCCGCCGC TATCAAGTGG ACATGTCTCA AGCGCTGGTC
GAGGACCTCA CCTCGTACGA ACACTTCAAC GCGTTCTTCA CCCGCGCGCT GAAAGCCGAT
GCCCGCCCGA TGGACACCAC GCCTGGCGCG ATTCTTTCGC CAGCCGACGG CGCCATCAGC
CAGTTGGGCC CTATCGATCA CGGCCGCATT TTCCAGGCCA AGGGCCACAG CTTCAGCGTG
CTTGAGCTGC TGGGCGGTGA TCCAAAGCTC TCCGCGCCGT TCATGGGCGG CGAGTTCGCG
ACCGTTTACC TGTCGCCGAA GGACTACCAC CGCGTACACA TGCCATTGGC CGGTACGCTG
CGCGAAATGG TCTATGTGCC GGGCCGTATC TTCTCGGTCA ACCAGACCAC CGCTGAAAAT
GTGCCGGAGC TGTTCGCCCG TAACGAGCGC GTGGTTTGCC TGTTCGACAC CGAGCGCGGG
CCGATGGCCG TGGTGCTGGT GGGTGCGATG ATCGTAGCGT CGGTCGAGAC GGTCTGGGCC
GGGCTGGTCA CGCCACCCAA GCGCGAACTG AAGACCTTCA GCTACGACGA AGCCGCGCGT
GCGCCGATTC ATCTGGAGAA AGGCGCCGAA ATGGGCCGCT TCAAACTGGG TTCTACCGCC
ATTGTGCTGT TCGGACCAAA CCAGGTGAAA TGGGCTGAAC AGTTGACCGC AGGCTCCAAG
GTTCAGATGG GCCAGGCGCT GGCAGCTCCA GCTCAGGCCT GA
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| Protein sequence | MSAFTGLSLV IEPNDLLERL DAPELILVDL TSSARYEAGH IRGARFVDPK RTQLGKPPAP
GLLPDTADLE QLFGELGHNP DAVYVVYDDE GGGWAGRFIW LLDVIGHSGY HYLDGGVLAW
EAQALPLSTE VPPVAGGPVA LTLHDEPTAT REYLQSRLGA DDLAIWDARA PTEYSGEKVV
AAKGGHIPGA VNFEWTAGMD KARNLRIRQD MPQILQDLGI TPDKEVITHC QTHHRSGFTY
LVAKALGYPR VKAYAGSWGE WGNHPDTPVE VPTVAVAPIE TAEVIEPAAP VQPAGTIEPV
RATEWSKGSQ KFSGHSSSGH SSSGPSMKDR LFILSQHLLP HHLLSRLAGC VAECRVRWFK
NAFTAWFARR YQVDMSQALV EDLTSYEHFN AFFTRALKAD ARPMDTTPGA ILSPADGAIS
QLGPIDHGRI FQAKGHSFSV LELLGGDPKL SAPFMGGEFA TVYLSPKDYH RVHMPLAGTL
REMVYVPGRI FSVNQTTAEN VPELFARNER VVCLFDTERG PMAVVLVGAM IVASVETVWA
GLVTPPKREL KTFSYDEAAR APIHLEKGAE MGRFKLGSTA IVLFGPNQVK WAEQLTAGSK
VQMGQALAAP AQA
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