Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4952 |
Symbol | motB |
ID | 1186637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5612121 |
End bp | 5613146 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637396273 |
Product | chemotaxis motB protein |
Protein accession | NP_794685 |
Protein GI | 28872066 |
COG category | [N] Cell motility |
COG ID | [COG1360] Flagellar motor protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.457077 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA ATCAGCCGAT TATCATCAAG CGCGTAAAGC GCTTTGGTGG CGGACATCAC GGCGGTGCCT GGAAAATCGC ATTTGCCGAC TTCGCGACGG CGATGATGGC GTTCTTTCTG GTGCTGTGGC TGATGTCCTC TGCAACGCCG GAGCAGCTGC TCGCGGTGGC CGGTTACTTC AAAGACCCGG TCGGCTTCTC CGACAGCGGC TCACCGTATG TGATCGACCT GGGCGGCTCG CCGGAAATGT CGCCGAACCA GACGCTCAAC CCTGAGGTCA AGACCACCCC TTCGCCAGAC ACGGTGCCTA TTGAGGCCGA AACGTCGGAA ACCAAGGCCG AGGCGGTCGA GCAGGAGCGT CTGGAGATGC TGTTGCAGGA GCTGCAGAAC AAGGTCGAGG AAAACCCGCA ACTGCAGAAA TTCAAGGACC AGATTCTGTT CGAGATCACC CAGGACGGGT TGCGTATCCA GATAATGGAC GCCGACAACC GACCGATGTT CGACTCGGGC AGTGCGCGTC TGAAGCCTTA TTTTGAAGAC ATCCTGCTGG CGCTGGCTGA CACGATCAGA AGCGTGCCTA ACAAGATCAG CATCAGTGGC CACACCGATG CGACGCCATT CGTTGGTAAC AACGGCTTTG GCAACTGGGA GCTGTCGGCC AACCGTGCCA ACGCTGCGCG CCGTGCGCTG GTCGCTGGTA CTTATCCGGA TTCACAGGTG GCCAGAGTCG TGGGTTATGC CTCGTCGGCG CTGTATGACC GCGAGAACCC GACCAACCCG GTCAACCGCC GCATTGATAT CGTGGTGCTG ACCAAAAAGG CTCAGCATCG TATCGAAGGC GATCAGAACT CCGGTGGTGC ACCGCCAGTC AAGCCTGCAC CAGCGCCTGC CGGTGGTCCC GCTGCGCCAG GCGCTTCGAC TGCCGCGCCG GTCGATCCGC AGGCCTACGC CCAGCCACAC GAGATCCGGC AGAAGCTGAA CATCTTCGAT GAGGGCAAGT TACGGGTCGA GCCGGCCCAG AACTGA
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Protein sequence | MENNQPIIIK RVKRFGGGHH GGAWKIAFAD FATAMMAFFL VLWLMSSATP EQLLAVAGYF KDPVGFSDSG SPYVIDLGGS PEMSPNQTLN PEVKTTPSPD TVPIEAETSE TKAEAVEQER LEMLLQELQN KVEENPQLQK FKDQILFEIT QDGLRIQIMD ADNRPMFDSG SARLKPYFED ILLALADTIR SVPNKISISG HTDATPFVGN NGFGNWELSA NRANAARRAL VAGTYPDSQV ARVVGYASSA LYDRENPTNP VNRRIDIVVL TKKAQHRIEG DQNSGGAPPV KPAPAPAGGP AAPGASTAAP VDPQAYAQPH EIRQKLNIFD EGKLRVEPAQ N
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