Gene PSPTO_4952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4952 
SymbolmotB 
ID1186637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5612121 
End bp5613146 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content60% 
IMG OID637396273 
Productchemotaxis motB protein 
Protein accessionNP_794685 
Protein GI28872066 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.457077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATA ATCAGCCGAT TATCATCAAG CGCGTAAAGC GCTTTGGTGG CGGACATCAC 
GGCGGTGCCT GGAAAATCGC ATTTGCCGAC TTCGCGACGG CGATGATGGC GTTCTTTCTG
GTGCTGTGGC TGATGTCCTC TGCAACGCCG GAGCAGCTGC TCGCGGTGGC CGGTTACTTC
AAAGACCCGG TCGGCTTCTC CGACAGCGGC TCACCGTATG TGATCGACCT GGGCGGCTCG
CCGGAAATGT CGCCGAACCA GACGCTCAAC CCTGAGGTCA AGACCACCCC TTCGCCAGAC
ACGGTGCCTA TTGAGGCCGA AACGTCGGAA ACCAAGGCCG AGGCGGTCGA GCAGGAGCGT
CTGGAGATGC TGTTGCAGGA GCTGCAGAAC AAGGTCGAGG AAAACCCGCA ACTGCAGAAA
TTCAAGGACC AGATTCTGTT CGAGATCACC CAGGACGGGT TGCGTATCCA GATAATGGAC
GCCGACAACC GACCGATGTT CGACTCGGGC AGTGCGCGTC TGAAGCCTTA TTTTGAAGAC
ATCCTGCTGG CGCTGGCTGA CACGATCAGA AGCGTGCCTA ACAAGATCAG CATCAGTGGC
CACACCGATG CGACGCCATT CGTTGGTAAC AACGGCTTTG GCAACTGGGA GCTGTCGGCC
AACCGTGCCA ACGCTGCGCG CCGTGCGCTG GTCGCTGGTA CTTATCCGGA TTCACAGGTG
GCCAGAGTCG TGGGTTATGC CTCGTCGGCG CTGTATGACC GCGAGAACCC GACCAACCCG
GTCAACCGCC GCATTGATAT CGTGGTGCTG ACCAAAAAGG CTCAGCATCG TATCGAAGGC
GATCAGAACT CCGGTGGTGC ACCGCCAGTC AAGCCTGCAC CAGCGCCTGC CGGTGGTCCC
GCTGCGCCAG GCGCTTCGAC TGCCGCGCCG GTCGATCCGC AGGCCTACGC CCAGCCACAC
GAGATCCGGC AGAAGCTGAA CATCTTCGAT GAGGGCAAGT TACGGGTCGA GCCGGCCCAG
AACTGA
 
Protein sequence
MENNQPIIIK RVKRFGGGHH GGAWKIAFAD FATAMMAFFL VLWLMSSATP EQLLAVAGYF 
KDPVGFSDSG SPYVIDLGGS PEMSPNQTLN PEVKTTPSPD TVPIEAETSE TKAEAVEQER
LEMLLQELQN KVEENPQLQK FKDQILFEIT QDGLRIQIMD ADNRPMFDSG SARLKPYFED
ILLALADTIR SVPNKISISG HTDATPFVGN NGFGNWELSA NRANAARRAL VAGTYPDSQV
ARVVGYASSA LYDRENPTNP VNRRIDIVVL TKKAQHRIEG DQNSGGAPPV KPAPAPAGGP
AAPGASTAAP VDPQAYAQPH EIRQKLNIFD EGKLRVEPAQ N