| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4948 |
|---|
| Symbol | |
|---|
| ID | 1186633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 5608483 |
|---|
| End bp | 5609571 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637396269 |
|---|
| Product | iron-sulfur cluster-binding protein |
|---|
| Protein accession | NP_794681 |
|---|
| Protein GI | 28872062 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1600] Uncharacterized Fe-S protein |
|---|
| TIGRFAM ID | [TIGR00276] iron-sulfur cluster binding protein, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTA TTACTGCTCC ACTCCCCACA CTTGATGATC TTGCCACCCT TACCTTGTCG
ATCAAGGCGT GGGGGCGTGA GCTGGGCTTT CAGGAAGTAG GGATCAGCGG GCTTGACCTG
GCAGAGCACG AGCAGCACTT GCAGCGCTGG CTTGACGCAG GCTATCACGG CGAAATGGAC
TATATGGCCG CCCACGGCAG CAAACGTTCC CACCCGGACG AACTGGTGCC GGGAACGTTG
CGCGTGGTGT CGCTGCGCAT GGACTATCTG CCCGGCGACA CCGAAATGGC GCAACGCCTG
ACCGAGCCGG AAAAAGCCTA TGTGTCCCGC TACGCCTTGG GCCGCGACTA TCACAAGCTG
ATCCGCAAGC GCCTGCAACA ACTGGCCGAG CGCATCCAGC AAGCTATCGG ACCCTTTGGC
TTTCGAGCGT TCGTGGACAG CGCGCCGGTG CTGGAAAAAG CCATTGCCGA GCAGGCAGGG
CTGGGCTGGA TCGGCAAGAA CACACTAGTA CTCAACCGTA AGGCCGGGAG CTTTTTCTTC
CTCGGCGAGC TGTTTGTCGA TATCCCGCTG CCGGTGGATG CACCTCACGC GACTGAACAC
TGCGGGCGCT GTACCGCCTG CCTGGACATC TGCCCGACGG CGGCCTTTGT CGGGCCTTAT
GTGCTGGATG CGCGACGGTG CATCTCCTAC CTGACCATCG AGCTTAAAAC CGCAATTCCC
GAAGAGCTTC GCCCGCTGAT TGGTAACAGG GTGTTTGGCT GTGACGATTG CCAGATCGTC
TGCCCGTGGA ACCGCTTCGC CCGCCCAACC GATCAAAGCG ACTTCCAGCC ACGCCATAAC
CTGGACAACG CCGGGCTGGC CGAGCTGTTT CTGTGGGATG AAGAAAAGTT TCTCGGCAGC
ACCGAAGGCT CGCCACTGCG CCGGGCGGGT TATGAGCGCT GGCTACGTAA CCTGGCCGTA
GGACTGGGCA ACGCGCCGTC CACCATCCCG GTGATCGAAG CCCTCCAAGC ACGGCGCGAT
TACCCGTCGG AGCTGGTCAG GGAACATGTG GAATGGGCGT TGCAGCGGCA TGGCGTGGCG
CCGCTTTAA
|
|---|
| Protein sequence | MSAITAPLPT LDDLATLTLS IKAWGRELGF QEVGISGLDL AEHEQHLQRW LDAGYHGEMD
YMAAHGSKRS HPDELVPGTL RVVSLRMDYL PGDTEMAQRL TEPEKAYVSR YALGRDYHKL
IRKRLQQLAE RIQQAIGPFG FRAFVDSAPV LEKAIAEQAG LGWIGKNTLV LNRKAGSFFF
LGELFVDIPL PVDAPHATEH CGRCTACLDI CPTAAFVGPY VLDARRCISY LTIELKTAIP
EELRPLIGNR VFGCDDCQIV CPWNRFARPT DQSDFQPRHN LDNAGLAELF LWDEEKFLGS
TEGSPLRRAG YERWLRNLAV GLGNAPSTIP VIEALQARRD YPSELVREHV EWALQRHGVA
PL
|
|---|
| |