Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4946 |
Symbol | |
ID | 1186631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5606471 |
End bp | 5606899 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637396267 |
Product | hypothetical protein |
Protein accession | NP_794679 |
Protein GI | 28872060 |
COG category | [R] General function prediction only |
COG ID | [COG0802] Predicted ATPase or kinase |
TIGRFAM ID | [TIGR00150] ATPase, YjeE family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTTG GTGCACGCCT TGCGCAGGTC ACCGAGGGCG CAGGCGTGAT CTTTCTGGAC GGCGATCTGG GCGCCGGAAA AACCACCCTT TCGCGGGGCA TGATTCGCGG GTTCGGGCAT GCCGGGGCTG TCAAGAGCCC GACTTTCACG CTGGTCGAGC CTTACGAAAT CGGTGCAATA CGCGTGTTTC ACTTCGACCT GTATCGGCTG GTCGATCCTG AAGAGCTCGA GTACATGGGC GCACGCGATT ACTTCGATGA CGATGCACTT TGCCTGATTG AATGGCCCCA GCGTGGTGCA GGCTTTTTGC CAAAGCCTGA CCTGACCATT ACCATTGGGC CGCACGGTGA AGGTCGGTCC GTGATATTGA GCCCGCTGGG CTCGCGTGGT GAGCGCTGGT GTGCCACTTT GGCTTTGGAA TTCAAATAG
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Protein sequence | MSFGARLAQV TEGAGVIFLD GDLGAGKTTL SRGMIRGFGH AGAVKSPTFT LVEPYEIGAI RVFHFDLYRL VDPEELEYMG ARDYFDDDAL CLIEWPQRGA GFLPKPDLTI TIGPHGEGRS VILSPLGSRG ERWCATLALE FK
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