| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4945 |
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| Symbol | |
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| ID | 1186630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5605041 |
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| End bp | 5606456 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637396266 |
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| Product | N-acetylmuramoyl-L-alanine amidase, family 3 |
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| Protein accession | NP_794678 |
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| Protein GI | 28872059 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATGC GCGCGCTGGT TACTGTAGTT GGTCTGCTGT TGATGGCCCT AGCTGTCGAG
GCGGTTGCCG CTACGCAAGT ACGAAGTGTC CGCTTATGGC GAGCGCCGGA TAACACGCGT
CTGGTGTTCG ACCTGTCCGG GCCTGTCCAG CACAGCGTAT TTACCCTGAC GTCGCCTGAT
CGTCTGGTGA TCGACATCAA TGGCGCCACT TTGGGTGGTC CGCTGAACGT GTCGACCGCC
AATACGCCGA TCAGCAGCAT GCGTTCTGCT CAGCGCACGC CTACCGATCT GCGCGTGGTC
ATCGACCTGA AAAAGGCCGT GACCCCTAAA AGCTTCACGC TCGCGCCGAA CCAGCAATAC
GGTAACCGTC TGGTGGTTGA CCTGTTCGAC AGCGCCGCCG ACGCCAATCC GACGCCGGTT
ATCCCCGATA CCGCCGCCAA TACTGCGCCA GCGGTTCCGG TCAGCCCGGC CAAGCCTGAA
ATCAAACTGA CGCCGGTGCC TAACGGCAAG CGCGACATCG TGATCGTGAT CGATGCCGGG
CACGGCGGTG AGGACCCGGG GGCCTCGGGT GGCGCAGGGC AGAAAGAAAA GAACGTGGTG
CTGTCGATCG CCAAGGAGTT GCAGCGTCAG GTCAATGCTG AAAAAGGCTA CCGCGCCGAG
CTGACAAGGA CCGGCGACTA CTTTATTCCG TTGCGCAAAC GCACCGAGAT CGCCCGTTCC
AAGGGCGCCG ACCTGTTTGT GTCGATTCAC GCTGACGCCG CGCCGTCCAC GGCGGCCTTT
GGTGCGTCGG TGTTCGCGCT GTCTGATCGC GGCGCGACGT CTGAAACCGC GCGCTGGCTG
GCGGACAGTG AAAACCGTTC CGACCTGATC GGGGGCGCCG GTGCGGTAAG CCTCGATGAC
AAGGACCGTA TGCTTGCCGG TGTGTTGCTG GACTTGTCCA TGACCGCCTC GCTGTCTTCA
AGCCTGAACG TCGGCCAGAA AGTGTTGAGC AACATTGGCC GAGTGACCTC GCTGCACAAA
TCCCGCGTCG AGCAGGCCGG CTTCATGGTG CTCAAGTCGC CGGACATTCC GTCGATTCTG
GTGGAAACAG GCTTCATCTC CAACGCTAAT GAAGCTAACA AGCTCTCTTC TGCGTCGCAC
CAGCAAGCCT TGGCGCGTTC GATCAACTCT GGCGTGAAAC AGTTCTTCCA GCAGAATCCG
CCGCAGGGCA CCTATATCGC CTGGCTGCGT GACACCGGCA AGCTGGCCCA GGGGGCGCGC
AACCATGTGG TGCGCTCCGG CGAAACCCTG GCCATGCTCG CGGCGCGCTA TGACATGAAC
ATCGCCACGC TGCGCAGTGC CAATAACCTG AAAACCGATG AATTGAAAAT CGGCCAGGAC
CTGCGAATTC CGAGCGCCGA GGTTGCGACC CAGTAA
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| Protein sequence | MRMRALVTVV GLLLMALAVE AVAATQVRSV RLWRAPDNTR LVFDLSGPVQ HSVFTLTSPD
RLVIDINGAT LGGPLNVSTA NTPISSMRSA QRTPTDLRVV IDLKKAVTPK SFTLAPNQQY
GNRLVVDLFD SAADANPTPV IPDTAANTAP AVPVSPAKPE IKLTPVPNGK RDIVIVIDAG
HGGEDPGASG GAGQKEKNVV LSIAKELQRQ VNAEKGYRAE LTRTGDYFIP LRKRTEIARS
KGADLFVSIH ADAAPSTAAF GASVFALSDR GATSETARWL ADSENRSDLI GGAGAVSLDD
KDRMLAGVLL DLSMTASLSS SLNVGQKVLS NIGRVTSLHK SRVEQAGFMV LKSPDIPSIL
VETGFISNAN EANKLSSASH QQALARSINS GVKQFFQQNP PQGTYIAWLR DTGKLAQGAR
NHVVRSGETL AMLAARYDMN IATLRSANNL KTDELKIGQD LRIPSAEVAT Q
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