Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4940 |
Symbol | hflK |
ID | 1186625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5599181 |
End bp | 5600368 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637396261 |
Product | hflK protein |
Protein accession | NP_794673 |
Protein GI | 28872054 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTGGA ATGAGCCGGG TGGCAACTCG AATAATCAAG ATCCCTGGGG TGGAAAACGC CGTGGCGGCG ACCGCAAGGG GCCACCTGAT CTCGACGAGG CCTTCCGTAA GCTGCAGGAA AGCCTGAAGG GGTTGTTCGG CGGCGGTAAC AAACGTGGCA GCGATGGCGG CAGCGGCAAT GGCGGTGGTT CAGGCAAGGG CGGTGGCTTT GGTCTGCTCG GCATTGGCTT GGTCGTGCTC GTCGCGTTCT GGCTCTACAG CGCTATCTAT GTTGTCGATG AGCAAGAACA GGCTGTCGTG TTGCGTTTTG GCCAGTACCA CGAAACCGTG GGGCCGGGCC TTAACATCTA CTTCCCGCCG TTCGATCGCA AGTACATGGA AAACGTGACT CGCGAACGTG CCTACAGCAA GCAGGGCCAG ATGCTCACCG AAGACGAGAA CATCGTTGAA GTGCCACTGA CCGTGCAGTA CAAGATCAGC AATCTGGAAG CTTTCGTCCT GAACGTCGAT CAGCCTGAAA TCAGCCTGCA GCACGCGACT GAAAGTGCGC TGCGCCACGT CGTGGGTTCC ACTGCGATGG ATCAGGTACT GACTGAAGGC CGTGAACTGA TGGCCAGCGA AATCAAGGAG CGTCTGCAAC GTTTCCTCGA TACCTACGGC ACCGGTATCA CCGTTACTCA GGTAAACGTG CAGAGCGCTG CCGCGCCACG CGAAGTTCAG GAAGCGTTCG ATGACGTGAT CCGCGCCCGT GAAGACGAGC AACGTTCACG CAACCAGGCT GAAAGCTACG CCAACGGTGT CATTCCGGAA GCCCGCGGTC AGGCTCAGCG CATCCTCGAA GATGCCAACG GCTACCGTGA TGAAGTGGTT TCGCGCGCCA AGGGTGAGGC TGACCGCTTT ACCAAACTGG TCGCCGAATA CCGCAAGGCG CCTGAAGTCA CTCGCCAGCG TCTGTATCTG GACACCATGC AGGAAGTCTT CAGCAACACC AGCAAGGTTC TCGTGACCGG TGACAAAGGG CAGAACAACC TGCTTTACCT CCCGCTCGAC AAGATGATCG AAAGCAGCCG CAGCACTACC GGCAATGGCT CAGCTACCGG CACGCCATCT CAGTCCAATA CTGATACTGC CGCGCGAGCG GCCGATACTC AGCAGCGCGG TGAAGTGCGT ACAAGGGAGA CTCGCTGA
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Protein sequence | MAWNEPGGNS NNQDPWGGKR RGGDRKGPPD LDEAFRKLQE SLKGLFGGGN KRGSDGGSGN GGGSGKGGGF GLLGIGLVVL VAFWLYSAIY VVDEQEQAVV LRFGQYHETV GPGLNIYFPP FDRKYMENVT RERAYSKQGQ MLTEDENIVE VPLTVQYKIS NLEAFVLNVD QPEISLQHAT ESALRHVVGS TAMDQVLTEG RELMASEIKE RLQRFLDTYG TGITVTQVNV QSAAAPREVQ EAFDDVIRAR EDEQRSRNQA ESYANGVIPE ARGQAQRILE DANGYRDEVV SRAKGEADRF TKLVAEYRKA PEVTRQRLYL DTMQEVFSNT SKVLVTGDKG QNNLLYLPLD KMIESSRSTT GNGSATGTPS QSNTDTAARA ADTQQRGEVR TRETR
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