| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4936 |
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| Symbol | |
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| ID | 1186621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5593402 |
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| End bp | 5595336 |
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| Gene Length | 1935 bp |
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| Protein Length | 644 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637396257 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_794669 |
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| Protein GI | 28872050 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTGCAG TCTTGTCTCT CTTGCAAAGT CGTCTGCTGC GCCCGGTCTT TATTGCGCTT
GGCATTGCCC TTTTGGTGCA GGTCATCGTG GCGGTTGCTC TTACCCGGAG CACGGTCACG
GCGCTTGAGG CGGATCTTGC CAATCGCCTG GGGATAGATT CGCAACACCT GTCCTCGGAG
CTTGAACTGG CGAGTAGCGA AGTGACGTCG AGCCTCGACG CCCTGTCTGC CAGTACCCGC
CAGCGTCTGA GTGTCGGGCT GTCGACGCGC CTGAAAGAAG AGCAGGCGCA ACTGCGTGCC
ACGCTTGAAA AAGACCTGAG AGAATCCGCC ACCGACATGG CCGAATTGCT TGCCGCCGTC
GCCCCGCGAG CCATGTGGGA TAACGACACG CCAACCCTTT CCGAATTTGC CCGCCGCGCC
CAGCGCAATC CCAACGTGTT GTTCGTGGTT TATGACGACG CGGCGGGCGA GCACCTCACC
CGCTATATGA GCCGGGATAA CCCGCTGGTC AAGGCGCTGC TGGCCAAGGG TGAAGGCGAG
CGGGCGATGG ACAAGGTTCT GAGCGCTGCG AAAAACGATC CTTCGGTGTA TTACGTCGAG
GCCTCTATCA GTCCCAACGG CGTGGAGATC GGCAAGGTGC GCATGGGTGT GTCCACCGCG
ACCGTCGAGG AGAACCTGGC GGCGCTGGAC AAGCGTTTCG CCACACTCAT TACCAGCGGC
GAGCAACTGG TTTCCGACAG CCTTGCCAGT GCGTCCAAAG ACAGCTCGAC TGCCTTGCGC
ACGCGCCTGC AATCTGCTCA GGCAGCGGGG GTGGCAATGA CCGGCAATAC ACGTGTTGCG
GTTCAGGAAG CGGCCGAAAC GCTGCGCTGG CGGATCGGCA TGGGCCTGGC GCTGGTGGGT
CTTGGTGTGC TGTTGTTGCT GGCTGTGGTG CTGGGGCGTC GAGTGGTCAG CAAGCTGCAC
CTGCTGATCG CTGCACTCAA TGACCTGGCG GCGGGTGAGG GTGACCTGAC CAAACGCGTC
AAGCTGGACA GCAACGACGA GATCGGCGAC ATGTCGGCAG CGGTCAACCG CTTCATCGAC
AAGCTGCAAC CTATTGTGCG CGAGGCCGGT GAAGTGGCGC AGCGCACGGG TGTGGAAATC
GGTGTCATGA GTCAGCGCAA CGCCGGAGCT GATGCCGCCG CCGAGTTGCA GCGCGACGAA
GTGGCTGCAA GCTTGAAGGC GCTCGGGCAA ATGGCCGACG AGGCGCAGTC GGAAAGCCAC
GCGATGCAGG CGGCTTTGCG TCAGGTTATC GACATCAAGC AGGCGACCGA CGAAAACACC
CGCACGTCCA GTCAGGTCGG CGGGTTGATC GAAGCGCTGG CCGGGCAGGT CGAGACCGGT
GCACAGGTCA TTGAGCGTCT GGCGCAGCAA AGCCAGCAGA TCGAGGTTGT GCTGGAAGTC
ATCCACGGCA TTGCCGAGCA AACCAACCTG CTTGCGCTCA ACGCAGCCAT CGAAGCCGCA
CGTGCCGGCG AGACGGGCAG GGGCTTTGCC GTGGTGGCCG ATGAGGTGCG GGCGCTGGCC
AGCAAGACGC AGAGTTCGAC GGGTGATATT CAGGAGCACA TCATCGCCTT GCAGCGCGGT
GCCAAAGAAG CAGTGGCCGC CATCGGCATC GCTGGCCGAC AGGCCAAGGA AGGGCTGGAG
GTATTACGCG ACAGCGCCAA GCGCCAGCAG ACCGTACAGG CGTCCGTCGA GCAGGTGCAT
GCGGCCATTG GTCTGGCGAC TCAGGCTGCC GTTCATCAGG CTGAAGGTGC CCAGGCGGTG
CGCGGTCGGG TAGAGGTGAT TCACGCTCAG GCCGAGAAGG CCGCCAAGGC TGTGGTCGAA
ACAACCGCCA GCGGGAAAGT GCTCAACGGG CTGGCTGCGC AGTTGGAGGC GAGCCTGGGG
CAGTTTCGGG CTTGA
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| Protein sequence | MSAVLSLLQS RLLRPVFIAL GIALLVQVIV AVALTRSTVT ALEADLANRL GIDSQHLSSE
LELASSEVTS SLDALSASTR QRLSVGLSTR LKEEQAQLRA TLEKDLRESA TDMAELLAAV
APRAMWDNDT PTLSEFARRA QRNPNVLFVV YDDAAGEHLT RYMSRDNPLV KALLAKGEGE
RAMDKVLSAA KNDPSVYYVE ASISPNGVEI GKVRMGVSTA TVEENLAALD KRFATLITSG
EQLVSDSLAS ASKDSSTALR TRLQSAQAAG VAMTGNTRVA VQEAAETLRW RIGMGLALVG
LGVLLLLAVV LGRRVVSKLH LLIAALNDLA AGEGDLTKRV KLDSNDEIGD MSAAVNRFID
KLQPIVREAG EVAQRTGVEI GVMSQRNAGA DAAAELQRDE VAASLKALGQ MADEAQSESH
AMQAALRQVI DIKQATDENT RTSSQVGGLI EALAGQVETG AQVIERLAQQ SQQIEVVLEV
IHGIAEQTNL LALNAAIEAA RAGETGRGFA VVADEVRALA SKTQSSTGDI QEHIIALQRG
AKEAVAAIGI AGRQAKEGLE VLRDSAKRQQ TVQASVEQVH AAIGLATQAA VHQAEGAQAV
RGRVEVIHAQ AEKAAKAVVE TTASGKVLNG LAAQLEASLG QFRA
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