| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4929 |
|---|
| Symbol | dnaB |
|---|
| ID | 1186612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 5585537 |
|---|
| End bp | 5586931 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637396248 |
|---|
| Product | replicative DNA helicase |
|---|
| Protein accession | NP_794662 |
|---|
| Protein GI | 28872043 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0305] Replicative DNA helicase |
|---|
| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATA TATCCGCCCC CGAGCAATAC GATCTGCAAA CCGCTGCCCT GAAGGTGCCG
CCACACTCCA TCGAGGCTGA ACAGGCTGTG CTCGGTGGTC TGATGCTGGA CAACAACGCC
TGGGAGCGGG TGCTCGATCA AGTCTCTGAC GGGGATTTCT ATCGGCATGA CCACCGCCTG
ATTTTCCGCG CCATCGCCAA GCTGGCGGAT CAGAACAGCC CGATCGACGT GGTCACGCTG
GCCGAGCAAC TGGACAAGGA AGGGCAGACC TCTCAAGTCG GTGGCCTGGG CTACCTCAGT
GAGCTGGCGA AAAACACGCC TTCCGTGGCC AACATCAAGG CCTATGCGCA GATCGTCCGT
GCGCGGGCAA CGTTGCGACA GCTGATCGGC ATCAGCACCG AAATTGCCGA TAGCGCGTTC
AACCCGGAAG GGCGCACCGC CGAAGAGATT CTTGACGAAG CCGAACGGCA GATCTTCCAG
ATCGCCGAAG CACGGCCCAA GACCGGCGGC CCGGTCAGCG TCAATGACCT GCTGACCAAA
GCCATCGACC GTATCGACAC CCTGTTCAAC AGCGACAACG CCATCACCGG CCTGTCCACC
GGCTACACCG ACCTTGATGA AAAAACCAGC GGCCTGCAGC CGGCTGACCT GATCATCGTC
GCCGGTCGTC CGTCGATGGG TAAAACTACC TTCGCGATGA ACCTGGTTGA AAACGCTGTG
TTACGCAGCG ACAAGGTGGT GCTGGTCTAC TCGCTGGAGA TGCCAGGCGA ATCGCTGATC
ATGCGTATGT TGTCGTCGCT GGGGCGTATC GACCAGACCA AGGTGCGCGC CGGTCGCCTG
GACGACGATG ACTGGCCGCG TCTGACCTCT GCGGTCAATT TGCTCAATGA CCGCAAGCTG
TTCATCGACG ACACCGCTGG CATCAGCCCG TCGGAAATGC GCGCGCGCAC ACGCCGTATC
GTCCGCGAAC ACGGCGAAAT CGGCATGATC ATGATCGACT ACCTGCAGTT GATGCAGATT
CCCGGTTCCA GTGGCGACAA CCGTACCAAC GAGATTTCCG AGATTTCCCG CTCGTTGAAA
GCACTGGCCA AGGAATTCAA CTGCCCGGTC ATTGCTCTCT CGCAGCTCAA CCGCTCGCTG
GAGCAGCGCC CGAACAAACG CCCGATCAAC TCCGACCTCC GGGAATCCGG AGCGATCGAG
CAGGATGCCG ACGTCATCAT GTTCGTTTAC CGGGACGAGG TGTATCACCC GGAAACCGAG
CACAAGGGAA TTGCCGAGAT TATCATCGGC AAGCAGCGTA ACGGCCCCAT CGGCACCACG
CGCCTGGCGT TCATCGGCAA ATACACACGC TTCGAGAACC TGGCGCCGGG TAGTTACAAC
TTCGACGACG ATTGA
|
|---|
| Protein sequence | MNDISAPEQY DLQTAALKVP PHSIEAEQAV LGGLMLDNNA WERVLDQVSD GDFYRHDHRL
IFRAIAKLAD QNSPIDVVTL AEQLDKEGQT SQVGGLGYLS ELAKNTPSVA NIKAYAQIVR
ARATLRQLIG ISTEIADSAF NPEGRTAEEI LDEAERQIFQ IAEARPKTGG PVSVNDLLTK
AIDRIDTLFN SDNAITGLST GYTDLDEKTS GLQPADLIIV AGRPSMGKTT FAMNLVENAV
LRSDKVVLVY SLEMPGESLI MRMLSSLGRI DQTKVRAGRL DDDDWPRLTS AVNLLNDRKL
FIDDTAGISP SEMRARTRRI VREHGEIGMI MIDYLQLMQI PGSSGDNRTN EISEISRSLK
ALAKEFNCPV IALSQLNRSL EQRPNKRPIN SDLRESGAIE QDADVIMFVY RDEVYHPETE
HKGIAEIIIG KQRNGPIGTT RLAFIGKYTR FENLAPGSYN FDDD
|
|---|
| |