| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4924 |
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| Symbol | |
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| ID | 1186607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5573283 |
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| End bp | 5574176 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396243 |
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| Product | transglutaminase-like domain protein |
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| Protein accession | NP_794657 |
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| Protein GI | 28872038 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCT TCTACCAGAT TTTTCACGAC ACGCATTACA AGTACGACAC CCCGGTGTCG
CTGGCTCAGC AGCTGGCGCA CCTGTGGCCG CGCAGCAGTC CCTGGCAGCG TTGTACCGAG
CAGGCACTGG AGATTTTCCC GGCGCCCACC ACGCGGCGTG ATGAGCTGGA TGTGTTCGGC
AACCCGCTGA CGCGACTGGC GTTCGAGCGC CCGCACGACG AGTTGCAGGT CAACGCCCGG
CTACGTATCG AGGTACTGGA GCGGCCGCAG CTGGATTTCA ACCTGTCGCC GGAGTGGGAA
GTCACTCGCA ATGCGCTGAC TTACAGCGCC AAGCCGATGA CCGAGGACAT TCTTGAAGCC
TGCCGCTATC GCTTCGAATC ACCCTATGTG CACTTGAAGC GCTCGTTCGT CGAGTTCTCC
CAGGATTGCT TTCCCGTAGG GCGTCCTTTG TTGCTGGGCG TGCAGGCCTT GATGGAGAAG
ATTTTCGACG AGTTTACCTT CGATGAGGAG GCGACTCAGG TCGCTACACC GTTGGTCGAG
GTGCTGGAGA GTCGCCGCGG TGTGTGTCAG GACTTCGCCC ATCTGATGCT GGCGTGCCTG
CGTTCTCGTG GCTTGGCGGC GCGCTACGTG AGCGGCTACC TGCTGACTCA GCCCCCTCCC
GGCCAGCCAC GACTGATCGG CGCTGATGCA TCGCATGCCT GGGTCTCGGT ATTCTGCCCG
GCGTCAGGTT GGGTCGATTT TGACCCCACC AACAATGTTC AGCCTGCGCT GGAACACATC
AGCCTGGCCT GGGGCCGTGA CTTCTCCGAC GTGTCGCCGT TGCGCGGCGT GATTCTGGGG
GGTGGCTCGC ATGATCCCGA CGTTCGGGTG ACGGTAATGC CTGTCAGTGC TTAA
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| Protein sequence | MSAFYQIFHD THYKYDTPVS LAQQLAHLWP RSSPWQRCTE QALEIFPAPT TRRDELDVFG
NPLTRLAFER PHDELQVNAR LRIEVLERPQ LDFNLSPEWE VTRNALTYSA KPMTEDILEA
CRYRFESPYV HLKRSFVEFS QDCFPVGRPL LLGVQALMEK IFDEFTFDEE ATQVATPLVE
VLESRRGVCQ DFAHLMLACL RSRGLAARYV SGYLLTQPPP GQPRLIGADA SHAWVSVFCP
ASGWVDFDPT NNVQPALEHI SLAWGRDFSD VSPLRGVILG GGSHDPDVRV TVMPVSA
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