Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4924 |
Symbol | |
ID | 1186607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5573283 |
End bp | 5574176 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637396243 |
Product | transglutaminase-like domain protein |
Protein accession | NP_794657 |
Protein GI | 28872038 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCT TCTACCAGAT TTTTCACGAC ACGCATTACA AGTACGACAC CCCGGTGTCG CTGGCTCAGC AGCTGGCGCA CCTGTGGCCG CGCAGCAGTC CCTGGCAGCG TTGTACCGAG CAGGCACTGG AGATTTTCCC GGCGCCCACC ACGCGGCGTG ATGAGCTGGA TGTGTTCGGC AACCCGCTGA CGCGACTGGC GTTCGAGCGC CCGCACGACG AGTTGCAGGT CAACGCCCGG CTACGTATCG AGGTACTGGA GCGGCCGCAG CTGGATTTCA ACCTGTCGCC GGAGTGGGAA GTCACTCGCA ATGCGCTGAC TTACAGCGCC AAGCCGATGA CCGAGGACAT TCTTGAAGCC TGCCGCTATC GCTTCGAATC ACCCTATGTG CACTTGAAGC GCTCGTTCGT CGAGTTCTCC CAGGATTGCT TTCCCGTAGG GCGTCCTTTG TTGCTGGGCG TGCAGGCCTT GATGGAGAAG ATTTTCGACG AGTTTACCTT CGATGAGGAG GCGACTCAGG TCGCTACACC GTTGGTCGAG GTGCTGGAGA GTCGCCGCGG TGTGTGTCAG GACTTCGCCC ATCTGATGCT GGCGTGCCTG CGTTCTCGTG GCTTGGCGGC GCGCTACGTG AGCGGCTACC TGCTGACTCA GCCCCCTCCC GGCCAGCCAC GACTGATCGG CGCTGATGCA TCGCATGCCT GGGTCTCGGT ATTCTGCCCG GCGTCAGGTT GGGTCGATTT TGACCCCACC AACAATGTTC AGCCTGCGCT GGAACACATC AGCCTGGCCT GGGGCCGTGA CTTCTCCGAC GTGTCGCCGT TGCGCGGCGT GATTCTGGGG GGTGGCTCGC ATGATCCCGA CGTTCGGGTG ACGGTAATGC CTGTCAGTGC TTAA
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Protein sequence | MSAFYQIFHD THYKYDTPVS LAQQLAHLWP RSSPWQRCTE QALEIFPAPT TRRDELDVFG NPLTRLAFER PHDELQVNAR LRIEVLERPQ LDFNLSPEWE VTRNALTYSA KPMTEDILEA CRYRFESPYV HLKRSFVEFS QDCFPVGRPL LLGVQALMEK IFDEFTFDEE ATQVATPLVE VLESRRGVCQ DFAHLMLACL RSRGLAARYV SGYLLTQPPP GQPRLIGADA SHAWVSVFCP ASGWVDFDPT NNVQPALEHI SLAWGRDFSD VSPLRGVILG GGSHDPDVRV TVMPVSA
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