Gene PSPTO_4918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4918 
SymbolbraD 
ID1186601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5566645 
End bp5567559 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content57% 
IMG OID637396237 
Producthigh-affinity branched-chain amino acid ABC transporter, permease protein BraD 
Protein accessionNP_794651 
Protein GI28872032 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGGAA TCTTCCTGCA ACAAATGGTC AACGGACTCA CCCTCGGGTC TGTTTATGGC 
CTTATCGCCA TCGGCTACAC GATGGTCTAC GGCATCATCG GCATGATCAA CTTCGCCCAC
GGCGATGTGT ACATGATTTC CGCCTACCTG GCCGCTATCG GCCTCGCGGT TTTGTCTTTC
TTTGGACTGG AATCCTTTCC GTTCCTGATT CTCGGCACGC TGGTTTTCAC CATCGTGGTC
ACTGGCGTCT ACGGGTTTGT CATCGAGCGG GTGGCCTACA AGCCACTGCG TAACTCGACC
CGCCTGGCAC CGCTGATCAG CGCGATCGGT ATTTCCCTGA TTCTGCAGAA CTACGCGCAG
ATCAGTCAGG GCGCTCGCCA GCAAGGCGTG CCGACATTGC TTGAAGGCGC CTGGCGCTTC
GAGATCGGCA GCGGCTTTGT GCAGATCACC TACACCAAGA TCTTCATCCT GATTGCCGCG
TTCGTCGGCA TGGGCGTACT GACCTACATC ATCAAGTACA CCAAGCTGGG CCGCATGTGC
CGCGCCACGC AGCAGGACCG CAAGATGGCG TCGATCCTCG GCATCAACAC CGACCGTGTC
ATCTCCTACG TGTTCATCAT TGGTGCTGCC ATGGCTGCAC TGGCCGGTGT GCTGATCACC
ATGAATTACG GCACCTTCGA TTTCTATGCG GGCTTCATCA TCGGCATCAA GGCGTTCACG
GCTGCGGTAC TCGGCGGCAT TGGTTCGCTA CCGGGCGCCA TGCTGGGCGG TTTGATCCTC
GGAGTTGCCG AGTCGCAGTT CTCCGGTTTG ATCAACTCCG ATTACAAAGA CGTGTTCAGT
TTCGGCCTGT TGGTATTGAT CCTGATTTTC CGTCCCCAAG GCCTGCTGGG TCGCCCACTC
GTGGCGAAGG TATAA
 
Protein sequence
MDGIFLQQMV NGLTLGSVYG LIAIGYTMVY GIIGMINFAH GDVYMISAYL AAIGLAVLSF 
FGLESFPFLI LGTLVFTIVV TGVYGFVIER VAYKPLRNST RLAPLISAIG ISLILQNYAQ
ISQGARQQGV PTLLEGAWRF EIGSGFVQIT YTKIFILIAA FVGMGVLTYI IKYTKLGRMC
RATQQDRKMA SILGINTDRV ISYVFIIGAA MAALAGVLIT MNYGTFDFYA GFIIGIKAFT
AAVLGGIGSL PGAMLGGLIL GVAESQFSGL INSDYKDVFS FGLLVLILIF RPQGLLGRPL
VAKV