Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4918 |
Symbol | braD |
ID | 1186601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5566645 |
End bp | 5567559 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637396237 |
Product | high-affinity branched-chain amino acid ABC transporter, permease protein BraD |
Protein accession | NP_794651 |
Protein GI | 28872032 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGGAA TCTTCCTGCA ACAAATGGTC AACGGACTCA CCCTCGGGTC TGTTTATGGC CTTATCGCCA TCGGCTACAC GATGGTCTAC GGCATCATCG GCATGATCAA CTTCGCCCAC GGCGATGTGT ACATGATTTC CGCCTACCTG GCCGCTATCG GCCTCGCGGT TTTGTCTTTC TTTGGACTGG AATCCTTTCC GTTCCTGATT CTCGGCACGC TGGTTTTCAC CATCGTGGTC ACTGGCGTCT ACGGGTTTGT CATCGAGCGG GTGGCCTACA AGCCACTGCG TAACTCGACC CGCCTGGCAC CGCTGATCAG CGCGATCGGT ATTTCCCTGA TTCTGCAGAA CTACGCGCAG ATCAGTCAGG GCGCTCGCCA GCAAGGCGTG CCGACATTGC TTGAAGGCGC CTGGCGCTTC GAGATCGGCA GCGGCTTTGT GCAGATCACC TACACCAAGA TCTTCATCCT GATTGCCGCG TTCGTCGGCA TGGGCGTACT GACCTACATC ATCAAGTACA CCAAGCTGGG CCGCATGTGC CGCGCCACGC AGCAGGACCG CAAGATGGCG TCGATCCTCG GCATCAACAC CGACCGTGTC ATCTCCTACG TGTTCATCAT TGGTGCTGCC ATGGCTGCAC TGGCCGGTGT GCTGATCACC ATGAATTACG GCACCTTCGA TTTCTATGCG GGCTTCATCA TCGGCATCAA GGCGTTCACG GCTGCGGTAC TCGGCGGCAT TGGTTCGCTA CCGGGCGCCA TGCTGGGCGG TTTGATCCTC GGAGTTGCCG AGTCGCAGTT CTCCGGTTTG ATCAACTCCG ATTACAAAGA CGTGTTCAGT TTCGGCCTGT TGGTATTGAT CCTGATTTTC CGTCCCCAAG GCCTGCTGGG TCGCCCACTC GTGGCGAAGG TATAA
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Protein sequence | MDGIFLQQMV NGLTLGSVYG LIAIGYTMVY GIIGMINFAH GDVYMISAYL AAIGLAVLSF FGLESFPFLI LGTLVFTIVV TGVYGFVIER VAYKPLRNST RLAPLISAIG ISLILQNYAQ ISQGARQQGV PTLLEGAWRF EIGSGFVQIT YTKIFILIAA FVGMGVLTYI IKYTKLGRMC RATQQDRKMA SILGINTDRV ISYVFIIGAA MAALAGVLIT MNYGTFDFYA GFIIGIKAFT AAVLGGIGSL PGAMLGGLIL GVAESQFSGL INSDYKDVFS FGLLVLILIF RPQGLLGRPL VAKV
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