Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4916 |
Symbol | |
ID | 1186599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5564457 |
End bp | 5565332 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637396235 |
Product | high affinity branched-chain amino acid ABC transporter, ATP-binding protein |
Protein accession | NP_794649 |
Protein GI | 28872030 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAATG AAGTGATTCT TTCTGTCGAG CACCTGATGA TGCACTTTGG CGGCATCAAG GCCCTCAGCG ACGTCAGCCT CAAGGTGCGT CGCAACTCGA TTTTTGCCCT GATCGGTCCC AACGGTGCGG GCAAGACCAC GGTTTTCAAC TGCCTGACCG GTTTCTACAA GGCCACTGGC GGGCGCATCG AGCTGCACAC CCGCGGCAAG ACCACCAATG TGATCCGGCT GCTGGGCGAG CCGTTCAAGG CGACTGACTT TGTCTCGCCG AAAAGCTTTT TCAGCCGGGT GTACTACAAG ATGTTCGGCG GCACCCATCT GGTCAACCGG GCAGGGCTGG CGCGCACCTT CCAGAACATT CGCCTGTTCA AGGAAATGTC TGTGGTCGAG AACCTGCTGG TTGCCCAGCA CATGTGGGTC AACCGCAGCC TGATCAGCGG GATCCTCAAC ACCAAAGGCT ATCGCAAGGC CGAAGAGGAC GCGCTCAATA CGGCGTTCTA CTGGCTGGAA GTGGTCGATC TGGTGGATTG CGCCAACCGT CTGGCGGGCG AGCTGTCCTA CGGCCAGCAA CGCCGTCTGG AGATCGCCCG TGCCATGTGC ACGCGTCCGC AGGTGATCTG CCTGGACGAG CCGGCTGCCG GTCTCAACCC GCAGGAAACC GAGGCGCTGA GCGGCATGAT CCGCCTGCTG CGCGATGAAC ACGACATGAC CATTGTGCTG ATCGAGCACG ACATGGGCAT GGTCATGGGG ATTTCCGACG ATATTGTGGT GCTCGACCAC GGCAACGTGA TTGCCATGGG CGGGCCGGAA CAGATCCGCA ACGATCCGAA AGTGATCGCT GCGTACCTGG GCGCTGATGA AGAGGAGCTG GTATGA
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Protein sequence | MSNEVILSVE HLMMHFGGIK ALSDVSLKVR RNSIFALIGP NGAGKTTVFN CLTGFYKATG GRIELHTRGK TTNVIRLLGE PFKATDFVSP KSFFSRVYYK MFGGTHLVNR AGLARTFQNI RLFKEMSVVE NLLVAQHMWV NRSLISGILN TKGYRKAEED ALNTAFYWLE VVDLVDCANR LAGELSYGQQ RRLEIARAMC TRPQVICLDE PAAGLNPQET EALSGMIRLL RDEHDMTIVL IEHDMGMVMG ISDDIVVLDH GNVIAMGGPE QIRNDPKVIA AYLGADEEEL V
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